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IMGVR_UViG_3300014911_000466-3300014911-Ga0180301_100008197

Arc-Vir

IMGVR_UViG_3300014911_000466-3300014911-Ga0180301_100008197

Quality

69.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-78
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nrjB01 3.90.20.10 Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › 0.60 43.0 3.34e-01 76.4% 90.7%
D2 medium residues 84-141
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2uzgA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.66 49.0 4.23e-01 81.0% 68.4%
2bayE00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.65 46.0 4.58e-01 75.9% 89.8%
2yu4A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.63 46.0 3.98e-01 79.3% 70.2%
3vk6A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.63 45.0 4.49e-01 75.9% 91.5%
3mhsA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.62 48.0 3.81e-01 87.9% 54.3%
1w8kA02 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.61 42.0 3.42e-01 72.4% 67.3%
1i8nA00 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.61 42.0 3.71e-01 81.0% 48.3%
2cklB01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.58 44.0 4.15e-01 82.8% 84.5%
4aycA02 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.58 40.0 3.66e-01 74.1% 59.0%
2cklA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.58 44.0 3.84e-01 87.9% 70.4%
2csvA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.58 47.0 4.49e-01 96.6% 93.1%
3lrqB00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.57 45.0 4.17e-01 91.4% 86.3%
2k13X00 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.57 39.0 3.33e-01 72.4% 72.8%
1wgmA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.57 41.0 3.93e-01 81.0% 79.5%
1t1hA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.57 40.0 3.69e-01 75.9% 69.2%
2jz6A01 2.30.170.40 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 0.57 38.0 3.99e-01 82.8% 82.0%
3hctA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 41.0 3.55e-01 82.8% 58.7%
5trbA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 43.0 4.14e-01 87.9% 95.7%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.56 38.0 3.56e-01 70.7% 81.7%
2y43A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 43.0 3.84e-01 87.9% 73.9%
2yhoE00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 44.0 4.19e-01 91.4% 88.6%
5dinA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.55 40.0 3.26e-01 81.0% 47.5%
4r7eA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.55 42.0 4.03e-01 87.9% 95.7%
1jceA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 43.0 3.27e-01 91.4% 44.4%
2vp7A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.53 40.0 3.90e-01 87.9% 74.2%
3vm7A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 36.0 3.07e-01 72.4% 50.0%
2khoA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 39.0 2.98e-01 84.5% 39.6%
5d0iB00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.51 36.0 3.73e-01 75.9% 98.0%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4964347 904.1.1.55 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › PF26046 0.84 61.0 6.75e-01 75.9% 100.0%
3362593 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.70 54.0 4.35e-01 84.5% 77.9%
3618022 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.70 53.0 3.67e-01 93.1% 23.3%
3221207 376.1.6.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › zf-B_box 0.69 48.0 5.30e-01 74.1% 95.6%
3787741 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.66 50.0 4.94e-01 86.2% 78.3%
4026243 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.66 49.0 4.05e-01 82.8% 96.4%
3902772 376.1.1.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.65 46.0 4.42e-01 77.6% 77.1%
3594163 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.65 47.0 4.97e-01 79.3% 92.0%
4157459 377.1.1.12 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-C5HC2 0.64 49.0 3.52e-01 82.8% 28.8%
4937956 375.1.1.351 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26602 0.64 39.0 4.43e-01 72.4% 100.0%
3625527 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.64 46.0 4.73e-01 79.3% 94.5%
3793771 376.1.1.15 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse 0.63 45.0 3.94e-01 75.9% 73.9%
3637145 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.63 47.0 4.21e-01 86.2% 75.6%
3517104 376.1.1.5 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP 0.63 46.0 3.86e-01 82.8% 57.3%
4025808 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.62 45.0 4.65e-01 79.3% 92.7%
3300282 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.62 44.0 4.65e-01 77.6% 100.0%
4000318 390.1.1.1 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.62 42.0 4.21e-01 70.7% 86.7%
3401868 376.1.1.15 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse 0.62 45.0 4.17e-01 79.3% 84.0%
3918037 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.62 44.0 4.34e-01 79.3% 89.2%
3872106 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.61 43.0 4.36e-01 75.9% 96.4%
3782573 376.1.1.61 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 0.61 46.0 4.19e-01 84.5% 85.0%
3571832 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.61 43.0 4.36e-01 75.9% 96.4%
3665223 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.61 48.0 4.12e-01 91.4% 67.0%
3400187 376.1.1.5 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP 0.61 49.0 4.03e-01 91.4% 61.8%
3260323 376.1.1.6 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-MIZ 0.61 46.0 4.31e-01 86.2% 84.0%
3240236 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.61 45.0 4.32e-01 82.8% 84.3%
3347073 376.1.1.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.61 44.0 3.75e-01 79.3% 56.0%
3173131 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.60 49.0 3.78e-01 91.4% 44.4%
3492481 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.60 46.0 3.79e-01 84.5% 55.5%
3486692 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.60 43.0 3.67e-01 77.6% 62.0%
3344631 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.60 47.0 3.59e-01 87.9% 45.5%
3275027 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.60 44.0 3.60e-01 81.0% 50.4%
3816489 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.60 43.0 4.13e-01 79.3% 87.1%
3517305 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.60 48.0 4.17e-01 93.1% 71.6%
3730169 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.60 44.0 3.82e-01 81.0% 61.1%
3480920 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.60 47.0 3.87e-01 91.4% 61.7%
5059962 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.59 45.0 4.53e-01 84.5% 94.8%
4014325 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.59 44.0 4.22e-01 84.5% 91.4%
3213657 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.59 42.0 3.85e-01 77.6% 81.2%
3249904 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.59 42.0 3.90e-01 79.3% 66.3%
4011434 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.59 41.0 3.65e-01 77.6% 60.0%
3271900 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.59 43.0 4.04e-01 81.0% 78.7%
3481757 376.1.1.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.59 41.0 4.29e-01 75.9% 96.0%
4271737 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.59 44.0 3.94e-01 82.8% 72.9%
3424305 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.58 41.0 3.62e-01 75.9% 52.2%
3373774 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.58 41.0 3.96e-01 77.6% 68.6%
4004083 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.58 45.0 3.90e-01 91.4% 69.9%
4001214 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.58 47.0 4.18e-01 94.8% 76.7%
3405623 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.58 46.0 4.02e-01 91.4% 72.6%
3511257 376.1.1.6 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-MIZ 0.58 41.0 3.20e-01 75.9% 43.7%
3790868 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.58 46.0 3.79e-01 93.1% 59.2%
3499932 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.58 44.0 4.17e-01 86.2% 81.3%
3199522 376.1.1.15 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse 0.58 40.0 3.41e-01 75.9% 69.1%
3557730 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.58 43.0 3.54e-01 82.8% 78.3%
3737858 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.58 46.0 4.60e-01 93.1% 98.3%
3253680 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.58 43.0 3.95e-01 84.5% 75.9%
3478408 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.58 43.0 3.96e-01 82.8% 82.5%
3533740 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.58 42.0 3.94e-01 79.3% 77.3%
3994088 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.58 42.0 3.36e-01 81.0% 47.7%
3940154 2005.1.1.1 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 0.58 45.0 2.70e-01 82.8% 27.7%
4272127 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.58 42.0 3.68e-01 81.0% 57.9%
3787718 376.1.1.15 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse 0.58 41.0 3.57e-01 77.6% 58.9%
3833867 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.58 45.0 3.96e-01 91.4% 76.8%
3772258 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.57 42.0 4.16e-01 82.8% 87.7%
3532763 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.57 40.0 4.12e-01 77.6% 96.4%
3902544 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.57 42.0 3.52e-01 82.8% 56.4%
3713646 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.57 41.0 3.45e-01 79.3% 61.8%
3299216 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.57 44.0 3.94e-01 87.9% 78.4%
3517439 375.1.1.25 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tfb4 0.57 46.0 4.60e-01 98.3% 91.7%
None 0.57 42.0 3.75e-01 82.8% 70.0%
3729830 376.1.1.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.57 42.0 3.97e-01 82.8% 80.0%
3814654 376.1.1.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.57 40.0 3.42e-01 77.6% 52.4%
3844071 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.57 41.0 3.92e-01 82.8% 82.7%
3398412 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.57 41.0 3.77e-01 79.3% 71.2%
3929689 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.57 39.0 2.76e-01 77.6% 21.5%
3780886 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.56 45.0 3.71e-01 96.6% 62.4%
3244384 376.1.1.151 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2, PF30896 0.56 41.0 3.26e-01 82.8% 47.4%
3610797 376.1.1.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.56 38.0 2.66e-01 74.1% 20.9%
3788673 376.1.1.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.55 41.0 3.69e-01 82.8% 71.8%
3256805 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.55 40.0 4.10e-01 81.0% 96.4%
3254172 73.1.1.1 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.55 39.0 2.74e-01 81.0% 25.2%
3939707 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.55 40.0 3.61e-01 81.0% 72.9%
3306063 376.1.1.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.54 41.0 3.89e-01 87.9% 86.7%
3797988 376.1.1.43 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PRT6_C 0.54 38.0 3.10e-01 81.0% 51.9%
3629945 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.54 41.0 3.49e-01 91.4% 62.6%
3690656 376.1.1.15 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse 0.51 42.0 3.65e-01 98.3% 68.0%
3925196 376.1.1.6 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-MIZ 0.50 40.0 3.26e-01 94.8% 49.6%