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IMGVR_UViG_3300014911_000467-3300014911-Ga0180301_100201671

Arc-Vir

IMGVR_UViG_3300014911_000467-3300014911-Ga0180301_100201671

Quality

84.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-91
PDB
D2 medium residues 92-180_328-357
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p5zX02 3.55.50.10 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains 0.78 56.0 6.19e-01 74.8% 97.9%
4uhvA02 3.55.50.10 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains 0.76 53.0 5.98e-01 72.3% 95.7%
3gs9A02 3.55.50.40 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.75 55.0 6.12e-01 74.8% 97.8%
2m5jA00 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.61 41.0 4.30e-01 70.6% 76.6%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929757 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.88 60.0 6.31e-01 70.6% 97.3%
4809347 3070.1.1.16 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 0.86 58.0 6.98e-01 73.1% 100.0%
4988104 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.85 58.0 6.67e-01 70.6% 98.9%
4048982 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.83 55.0 6.62e-01 71.4% 100.0%
4889789 3070.1.1.16 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 0.82 57.0 6.64e-01 71.4% 97.7%
3968711 3070.1.1.2 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD 0.82 56.0 6.42e-01 70.6% 98.9%
4200887 3070.1.1.17 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › YQBQ 0.81 57.0 6.47e-01 71.4% 98.9%
3972306 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.81 57.0 6.51e-01 72.3% 97.8%
3966573 3070.1.1.2 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD 0.81 57.0 6.50e-01 72.3% 97.8%
3970829 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.81 57.0 6.47e-01 72.3% 97.8%
3943692 3070.1.1.2 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD 0.80 55.0 6.11e-01 70.6% 96.8%
3967438 3070.1.1.2 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD 0.79 56.0 6.36e-01 72.3% 97.8%
4846239 3070.1.1.12 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd 0.79 55.0 6.42e-01 72.3% 100.0%
3941987 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.75 52.0 5.97e-01 70.6% 98.8%
3967020 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.69 48.0 5.50e-01 71.4% 98.8%
3967349 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.66 46.0 5.24e-01 73.9% 100.0%
4580635 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.53 37.0 2.82e-01 72.3% 90.4%
3995944 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.53 37.0 2.39e-01 72.3% 46.1%
D3 medium residues 181-327
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.80 43.0 4.01e-01 89.1% 44.6%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.77 43.0 4.05e-01 89.1% 47.1%
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.76 44.0 5.48e-01 89.1% 90.5%
3cddA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.75 42.0 3.90e-01 100.0% 45.1%
2nwaA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.75 34.0 4.76e-01 89.1% 85.3%
3kyfA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.71 38.0 4.27e-01 89.1% 66.7%
2as9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 33.0 4.04e-01 89.1% 71.3%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.68 36.0 4.89e-01 88.4% 97.5%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 33.0 4.22e-01 86.4% 79.1%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.67 38.0 3.67e-01 88.4% 50.0%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.66 35.0 4.30e-01 89.8% 80.6%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 25.0 3.31e-01 78.9% 65.9%
2o8lA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 33.0 3.98e-01 89.1% 76.2%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.61 35.0 3.75e-01 89.1% 64.8%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.61 33.0 3.61e-01 89.1% 63.1%
1shyA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 33.0 3.88e-01 89.8% 75.5%
2x8kA01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.59 22.0 2.54e-01 86.4% 42.9%
1u8sA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 26.0 3.37e-01 81.6% 72.6%
7cayA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.58 31.0 3.67e-01 89.1% 75.0%
3d3bJ00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.57 25.0 3.20e-01 79.6% 67.8%
2gmqA00 2.40.450.10 Mainly Beta › Beta Barrel › PUA domain-like fold › PUA domain-like domain 0.57 33.0 3.91e-01 89.1% 83.8%
3fbqA02 2.60.40.1640 Mainly Beta › Sandwich › Immunoglobulin-like › Conserved domain protein. 0.57 30.0 3.15e-01 87.1% 54.0%
3f8uD03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 30.0 3.40e-01 85.0% 67.9%
3g2fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 28.0 3.57e-01 87.1% 81.6%
4c0tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 28.0 3.54e-01 87.1% 79.3%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 27.0 3.48e-01 85.7% 81.7%
5is2A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 26.0 3.22e-01 85.7% 71.4%
2apoA03 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 26.0 3.26e-01 82.3% 73.9%
2wtkC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 27.0 3.45e-01 87.1% 80.9%
2qrrA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 25.0 3.01e-01 83.0% 64.9%
7dl8C01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.53 27.0 3.36e-01 88.4% 78.7%
5qinA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 28.0 3.47e-01 87.1% 83.5%
3he1A00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.52 40.0 4.08e-01 89.1% 80.3%
2k3iA01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 24.0 3.00e-01 78.2% 69.4%
3cr8A01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.52 35.0 3.62e-01 89.1% 71.6%
6lynD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 22.0 2.72e-01 77.6% 59.8%
5w7tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 28.0 3.29e-01 87.1% 76.3%
6vbkA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.51 31.0 3.46e-01 89.1% 77.5%
3gniB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 27.0 3.34e-01 87.1% 83.1%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3973341 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.88 42.0 5.66e-01 89.1% 82.4%
3945543 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.82 42.0 5.57e-01 89.1% 88.2%
4647050 1.1.13.56 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ 0.79 40.0 5.36e-01 89.1% 91.3%
3972102 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.78 42.0 5.09e-01 89.1% 78.0%
5041375 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.78 43.0 5.53e-01 93.9% 90.0%
5002662 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.77 42.0 5.09e-01 89.1% 80.0%
4031753 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 46.0 5.66e-01 97.3% 93.7%
184471 1.1.13.26 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st 0.74 41.0 5.26e-01 89.1% 93.0%
3605269 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.74 38.0 4.53e-01 89.8% 73.0%
3720023 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 37.0 4.46e-01 89.8% 72.0%
4995816 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.73 43.0 5.35e-01 89.1% 91.6%
4889790 3071.1.1.7 a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › PF30637 0.72 67.0 6.48e-01 100.0% 97.0%
4033372 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.72 49.0 5.60e-01 98.6% 90.9%
5056905 1.1.7.28 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.72 33.0 4.23e-01 89.1% 72.2%
5026244 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.72 33.0 4.13e-01 89.1% 70.0%
4033714 1.1.13.7 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tail 0.71 40.0 4.93e-01 89.1% 86.3%
3325750 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.71 29.0 3.94e-01 83.7% 71.2%
4608778 1.1.7.107 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 0.70 36.0 4.00e-01 89.1% 60.8%
4031285 1.1.13.64 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal 0.70 40.0 5.06e-01 89.1% 92.2%
4988103 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.70 42.0 5.12e-01 89.1% 91.6%
2137681 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.69 36.0 4.15e-01 89.1% 67.9%
3974181 1.1.5.88 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PF29489 0.69 36.0 4.57e-01 89.1% 83.3%
3438815 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.69 31.0 4.03e-01 87.8% 74.1%
3824912 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.68 30.0 3.97e-01 85.0% 75.0%
4929759 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.67 56.0 5.51e-01 89.1% 96.2%
3590379 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.67 38.0 4.80e-01 89.1% 91.1%
3970827 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.67 38.0 4.96e-01 88.4% 97.6%
3831627 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.67 28.0 3.80e-01 84.4% 72.5%
4344991 1.1.5.35 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF 0.66 41.0 4.35e-01 89.1% 70.0%
3970830 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 40.0 4.82e-01 96.6% 91.0%
3588729 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.64 40.0 4.94e-01 88.4% 97.9%
4031101 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.63 35.0 3.78e-01 89.1% 62.3%
3941539 1.1.13.40 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail 0.63 43.0 5.01e-01 88.4% 97.1%
3981654 1.1.13.40 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail 0.62 43.0 4.94e-01 89.1% 95.5%
3284562 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.60 27.0 3.44e-01 84.4% 70.6%
3256920 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 39.0 4.18e-01 89.1% 76.0%
3367471 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.59 24.0 3.24e-01 78.9% 71.4%
4371656 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.57 26.0 3.17e-01 81.6% 65.3%
3303164 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 23.0 3.16e-01 79.6% 78.5%
4089549 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.55 34.0 4.14e-01 89.1% 96.8%
4323001 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.54 35.0 4.10e-01 89.1% 94.0%
5067380 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.53 38.0 3.95e-01 89.1% 77.9%
4965084 304.165.1.6 a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › HVO_2928_N 0.52 31.0 3.03e-01 89.8% 50.0%
4001734 304.47.1.0 a+b two layers › Alpha-beta plaits › SEA domain › SEA domain 0.50 28.0 3.07e-01 82.3% 65.2%