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IMGVR_UViG_3300014911_000467-3300014911-Ga0180301_100201672

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300014911_000467-3300014911-Ga0180301_100201672 ↗
Kingdom:: archaea

Quality

64.9 mean pLDDT

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 73-201_336-369

PDB

Domain cluster: rep: MN698245.1__QGZ18159.1__HTVC111P_gp46__00046__D46-220

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF10145.15 best	PhageMin_Tail	46.6	5.30e-12	57.1%	42.8%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3l8rA00	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.63	24.0	3.03e-01	100.0%	54.9%
1z2iA01	1.10.1530.10	Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel	0.62	29.0	3.66e-01	92.6%	73.1%
3i0pA01	1.10.1530.10	Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel	0.60	31.0	3.76e-01	94.5%	75.0%
4iloA00	1.10.287.1490	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.56	30.0	2.66e-01	84.0%	34.7%
2vy1A00	1.10.4180.10	Mainly Alpha › Orthogonal Bundle › Protein LEAFY › Protein LEAFY	0.52	33.0	3.34e-01	94.5%	61.3%
1f5qB01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.50	30.0	3.56e-01	76.7%	87.2%
5tpmB00	1.20.120.530	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like	0.50	29.0	3.13e-01	91.4%	65.2%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4032310	159.1.2.6 ↗	alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail	0.93	82.0	8.57e-01	94.5%	98.0%
3981280	159.1.2.6 ↗	alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail	0.82	64.0	6.83e-01	80.4%	97.9%
4986459	159.1.2.0 ↗	alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related	0.59	44.0	4.51e-01	85.3%	81.3%
5079565	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.54	25.0	2.45e-01	100.0%	41.1%
4014516	5001.1.1.80 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Dicty_CAR	0.52	40.0	3.23e-01	80.4%	90.8%
4231542	10.13.1.0 ↗	beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A	0.52	44.0	2.88e-01	91.4%	71.0%
5028522	1075.5.1.8 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3	0.52	43.0	3.69e-01	90.2%	97.8%
4974791	1075.5.1.8 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3	0.50	41.0	3.51e-01	89.6%	97.5%

D2 medium residues 202-335

PDB

Domain cluster: rep: IMGVR_UViG_3300028048_000061-3300028048-Ga0256405_1000034333__D181-342

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF10145.15 best	PhageMin_Tail	37.9	2.60e-09	77.6%	49.2%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1zkrB00	1.20.920.50	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A ›	0.55	42.0	4.16e-01	82.1%	91.7%
3n0uA02	1.10.340.30	Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2	0.55	33.0	3.59e-01	81.3%	71.6%
1grlB01	1.10.560.10	Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain	0.54	48.0	3.95e-01	97.8%	68.9%
6ks6a01	1.10.560.10	Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain	0.53	47.0	3.72e-01	97.8%	60.6%
1euhA01	3.40.605.10	Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1	0.53	37.0	2.99e-01	70.9%	76.6%
1zp2A02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.52	40.0	4.37e-01	92.5%	98.2%
7e4mA01	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.52	44.0	3.60e-01	94.8%	99.2%
1xn8A00	1.10.3230.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › YqbG-like	0.52	38.0	3.86e-01	85.1%	77.9%
4hjzA00	1.10.530.10	Mainly Alpha › Orthogonal Bundle › Lysozyme ›	0.52	46.0	4.18e-01	99.3%	95.6%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4030882	159.1.2.6 ↗	alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail	0.84	78.0	6.64e-01	100.0%	68.6%
5055779	3352.1.1.0 ↗	alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain	0.53	44.0	3.31e-01	91.8%	81.1%
4015733	132.1.1.0 ↗	alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP)	0.53	29.0	3.22e-01	83.6%	66.0%
5030144	3352.1.1.8 ↗	alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PTPS_related	0.51	44.0	3.37e-01	97.8%	93.4%
3773789	101.1.10.1 ↗	alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N	0.51	41.0	4.01e-01	97.0%	77.3%