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IMGVR_UViG_3300014911_000475-3300014911-Ga0180301_100090384
Arc-VirIMGVR_UViG_3300014911_000475-3300014911-Ga0180301_100090384
Identity
- Kingdom:
- archaea
Quality
86.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-75
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oc3A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.69 | 42.0 | 2.74e-01 | 100.0% | 13.3% |
| 2rajA02 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.67 | 43.0 | 3.34e-01 | 93.4% | 31.7% |
| 1lyvA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.67 | 47.0 | 3.04e-01 | 100.0% | 16.3% |
| 1vw4502 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 45.0 | 3.98e-01 | 98.4% | 52.2% |
| 2peeB02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.60 | 44.0 | 3.43e-01 | 78.7% | 79.4% |
| 3nqzA01 | 3.10.450.490 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 40.0 | 3.56e-01 | 100.0% | 49.5% |
| 1av4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.56 | 48.0 | 2.95e-01 | 100.0% | 78.3% |
| 6gp1A00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.54 | 39.0 | 3.85e-01 | 88.5% | 72.3% |
| 2pgeA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 34.0 | 2.85e-01 | 70.5% | 93.7% |
| 3cu3A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 44.0 | 3.30e-01 | 100.0% | 57.4% |
| 4fx9A03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.51 | 40.0 | 3.34e-01 | 100.0% | 47.8% |
| 4kz1A00 | 3.10.450.230 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein | 0.50 | 43.0 | 3.41e-01 | 100.0% | 62.2% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3749979 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.67 | 45.0 | 3.95e-01 | 98.4% | 46.7% |
| 4890537 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.67 | 47.0 | 4.85e-01 | 95.1% | 78.9% |
| 4066189 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.67 | 47.0 | 4.20e-01 | 96.7% | 52.9% |
| 3220263 | 2496.1.1.12 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › PHA-1 | 0.63 | 41.0 | 3.09e-01 | 75.4% | 26.7% |
| 4015125 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 46.0 | 4.31e-01 | 98.4% | 64.0% |
| 164676 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.61 | 45.0 | 2.70e-01 | 78.7% | 44.4% |
| 3741680 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 38.0 | 4.00e-01 | 100.0% | 74.5% |
| 3617706 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 47.0 | 4.00e-01 | 100.0% | 57.0% |
| 3255196 | 4970.1.1.28 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › SPC25 | 0.56 | 34.0 | 2.96e-01 | 100.0% | 35.9% |
| 3624726 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 43.0 | 2.74e-01 | 90.2% | 47.2% |
| 3394740 | 11.1.5.84 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › ERMP1_C | 0.53 | 45.0 | 3.53e-01 | 96.7% | 71.9% |
| 3416626 | 206.1.1.71 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo | 0.53 | 42.0 | 2.66e-01 | 90.2% | 45.6% |
| 3503871 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 40.0 | 2.62e-01 | 85.2% | 30.8% |
| 3926219 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 43.0 | 2.73e-01 | 95.1% | 33.7% |
| 5032539 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 44.0 | 4.34e-01 | 96.7% | 98.5% |
| 3599126 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.52 | 32.0 | 2.04e-01 | 100.0% | 10.4% |
| 4383895 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 42.0 | 2.76e-01 | 93.4% | 50.0% |
| 3596328 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.51 | 41.0 | 3.16e-01 | 100.0% | 51.8% |
| 4608279 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.50 | 38.0 | 3.74e-01 | 100.0% | 78.5% |
| 4941612 | 212.1.1.22 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Topo-VIb_trans | 0.50 | 42.0 | 2.94e-01 | 100.0% | 45.2% |