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IMGVR_UViG_3300014911_000475-3300014911-Ga0180301_100090389

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300014911_000475-3300014911-Ga0180301_100090389 ↗
Kingdom:: archaea

Quality

74.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-60

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1yxrA01	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.85	58.0	5.28e-01	70.7%	62.2%
1chuA03	1.20.58.100	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain	0.75	50.0	4.38e-01	70.7%	46.6%
7ymiD01	1.20.85.10	Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like	0.64	54.0	3.82e-01	94.8%	68.9%
3iylU02	1.10.287.1520	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.60	41.0	4.30e-01	70.7%	83.0%
2bnlC00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.60	51.0	3.87e-01	93.1%	78.4%
3of4A00	3.40.109.10	Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase	0.60	50.0	3.45e-01	94.8%	60.4%
3fblA00	1.20.58.800	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.60	40.0	3.68e-01	72.4%	50.0%
2ohfA03	1.10.150.300	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain	0.58	39.0	3.64e-01	70.7%	56.0%
4ex8A00	3.40.1790.10	Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain	0.57	39.0	2.52e-01	70.7%	59.8%
1xdxA01	3.30.1140.40	Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1	0.57	43.0	3.57e-01	81.0%	69.0%
1w36C04	1.10.486.10	Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4	0.56	47.0	3.35e-01	100.0%	46.4%
2z16B01	1.20.91.10	Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Influenza matrix M1, N-terminal subdomain 1	0.50	43.0	3.89e-01	94.8%	89.7%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3664015	3871.1.1.0 ↗	alpha duplicates or obligate multimers › PHIST › PHIST › PHIST	0.67	53.0	4.03e-01	87.9%	50.7%
3282520	325.1.7.0 ↗	a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif	0.67	57.0	5.35e-01	96.6%	77.1%
3936520	6132.1.1.0 ↗	alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain	0.64	45.0	4.38e-01	82.8%	66.2%
5034715	5065.1.1.1 ↗	alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3	0.64	48.0	3.08e-01	79.3%	64.1%
4324738	160.1.1.1 ↗	alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_ab_C	0.61	52.0	3.87e-01	100.0%	37.6%
3515411	3877.1.1.0 ↗	alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC	0.60	45.0	3.17e-01	84.5%	26.3%
2096499	3273.1.1.2 ↗	alpha arrays › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › Filamentous archaeal viruses coat proteins › MCP_C	0.60	40.0	3.68e-01	72.4%	50.0%
3655847	2003.1.1.28 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N	0.58	44.0	3.08e-01	75.9%	30.7%