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IMGVR_UViG_3300014911_000524-3300014911-Ga0180301_100119956
Arc-VirIMGVR_UViG_3300014911_000524-3300014911-Ga0180301_100119956
Identity
- Kingdom:
- archaea
Quality
86.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-135
Domain cluster:
rep: NC_029048.2__YP_009221738.1__PHICD211_20135__00153__D2-127
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13650.12 best | Asp_protease_2 | 31.4 | 3.60e-07 | 85.7% | 64.4% |
| PF13975.12 | gag-asp_proteas | 40.0 | 6.50e-10 | 83.8% | 91.3% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fmbA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.85 | 73.0 | 7.37e-01 | 97.1% | 91.3% |
| 3slzA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.84 | 75.0 | 7.27e-01 | 100.0% | 86.0% |
| 2fivA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.80 | 73.0 | 7.16e-01 | 97.1% | 90.3% |
| 2pmaA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.80 | 72.0 | 6.86e-01 | 95.2% | 94.2% |
| 2jysA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.80 | 64.0 | 6.80e-01 | 95.2% | 96.7% |
| 4ehcA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.76 | 70.0 | 5.07e-01 | 100.0% | 46.8% |
| 1j71A01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.76 | 70.0 | 5.86e-01 | 100.0% | 89.6% |
| 1wkrA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.75 | 69.0 | 5.82e-01 | 100.0% | 85.3% |
| 1bxoA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.74 | 68.0 | 5.83e-01 | 100.0% | 89.1% |
| 1qs8A01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.74 | 68.0 | 5.67e-01 | 100.0% | 86.9% |
| 3gw6A03 | 3.30.2460.10 | Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Endo-n-acetylneuraminidase domain | 0.57 | 18.0 | 2.47e-01 | 97.1% | 49.1% |
| 4ec6A00 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 33.0 | 3.33e-01 | 89.5% | 58.7% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 38.0 | 3.54e-01 | 77.1% | 93.1% |
| 2j8hA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 31.0 | 3.20e-01 | 74.3% | 64.3% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5031909 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.99 | 97.0 | 9.20e-01 | 100.0% | 89.0% |
| 4933942 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.97 | 93.0 | 8.94e-01 | 100.0% | 89.6% |
| 4955517 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.96 | 93.0 | 9.12e-01 | 99.0% | 94.5% |
| 4969842 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.96 | 93.0 | 8.98e-01 | 100.0% | 92.2% |
| 4992338 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.96 | 89.0 | 8.95e-01 | 100.0% | 96.2% |
| 5031732 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.94 | 90.0 | 8.68e-01 | 100.0% | 90.4% |
| 5032197 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.94 | 87.0 | 8.55e-01 | 99.0% | 91.8% |
| 4933116 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.94 | 88.0 | 8.53e-01 | 100.0% | 89.6% |
| 5031219 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.93 | 88.0 | 8.36e-01 | 99.0% | 96.7% |
| 5030771 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.93 | 88.0 | 8.50e-01 | 100.0% | 90.4% |
| 5030532 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.92 | 86.0 | 8.35e-01 | 99.0% | 89.6% |
| 4932925 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.92 | 86.0 | 8.21e-01 | 99.0% | 97.5% |
| 4492004 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.91 | 86.0 | 7.98e-01 | 100.0% | 90.6% |
| 4969351 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.90 | 84.0 | 8.12e-01 | 98.1% | 96.5% |
| 4928555 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.89 | 85.0 | 7.98e-01 | 100.0% | 89.5% |
| 5032277 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.89 | 85.0 | 7.94e-01 | 100.0% | 87.2% |
| 5023444 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.88 | 84.0 | 8.24e-01 | 100.0% | 99.1% |
| 3506527 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.88 | 76.0 | 7.81e-01 | 94.3% | 95.0% |
| 3927455 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.88 | 81.0 | 7.48e-01 | 98.1% | 86.9% |
| 5009916 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.87 | 79.0 | 7.99e-01 | 100.0% | 96.2% |
| 4993656 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.87 | 83.0 | 7.84e-01 | 100.0% | 92.5% |
| 3969410 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.87 | 73.0 | 6.97e-01 | 87.6% | 100.0% |
| 5073196 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.87 | 82.0 | 7.74e-01 | 100.0% | 87.0% |
| 4946870 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.87 | 82.0 | 7.42e-01 | 100.0% | 83.7% |
| 4968533 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.86 | 80.0 | 7.71e-01 | 97.1% | 96.5% |
| 4964766 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.86 | 82.0 | 8.08e-01 | 100.0% | 95.5% |
| 4969974 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.86 | 79.0 | 7.40e-01 | 97.1% | 92.8% |
| 5031038 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.86 | 81.0 | 7.55e-01 | 100.0% | 93.6% |
| 3932187 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.86 | 80.0 | 7.89e-01 | 99.0% | 97.3% |
| 5029170 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.85 | 80.0 | 7.40e-01 | 100.0% | 86.2% |
| 5059503 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.85 | 81.0 | 7.24e-01 | 100.0% | 82.6% |
| 3934130 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.85 | 80.0 | 7.35e-01 | 100.0% | 85.4% |
| 3724372 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.85 | 76.0 | 6.58e-01 | 95.2% | 69.7% |
| 3923810 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.85 | 78.0 | 7.59e-01 | 98.1% | 93.0% |
| 4969904 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.85 | 80.0 | 7.24e-01 | 100.0% | 80.0% |
| 3274948 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.85 | 76.0 | 6.56e-01 | 100.0% | 64.5% |
| 5028105 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.85 | 79.0 | 7.22e-01 | 100.0% | 85.2% |
| 4993154 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.84 | 79.0 | 7.35e-01 | 100.0% | 84.4% |
| 4656484 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.84 | 79.0 | 6.91e-01 | 100.0% | 86.7% |
| 3582847 | 1.1.2.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DUF1758 | 0.84 | 73.0 | 6.84e-01 | 92.4% | 95.2% |
| 3938624 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.84 | 76.0 | 7.39e-01 | 100.0% | 88.7% |
| 3797424 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.83 | 78.0 | 6.59e-01 | 100.0% | 86.1% |
| 3931768 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.83 | 76.0 | 7.13e-01 | 100.0% | 81.6% |
| 4968321 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.83 | 72.0 | 7.28e-01 | 91.4% | 99.0% |
| 4993389 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.83 | 78.0 | 7.40e-01 | 100.0% | 90.0% |
| 3484754 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 75.0 | 7.36e-01 | 100.0% | 91.8% |
| 3515226 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.82 | 75.0 | 7.56e-01 | 97.1% | 97.1% |
| 3513377 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.82 | 75.0 | 7.59e-01 | 100.0% | 98.1% |
| 5034399 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.82 | 77.0 | 7.04e-01 | 100.0% | 84.2% |
| 3931849 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.82 | 77.0 | 7.19e-01 | 100.0% | 86.4% |
| 3505920 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 75.0 | 7.38e-01 | 97.1% | 92.7% |
| 3926561 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.82 | 75.0 | 7.12e-01 | 100.0% | 85.8% |
| 3514852 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 73.0 | 7.36e-01 | 96.2% | 95.2% |
| 3793978 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.81 | 76.0 | 6.41e-01 | 100.0% | 90.3% |
| 3506070 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 76.0 | 6.49e-01 | 100.0% | 91.9% |
| 5077747 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 75.0 | 7.07e-01 | 100.0% | 88.0% |
| 4993449 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 68.0 | 6.89e-01 | 88.6% | 100.0% |
| 4968395 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 76.0 | 7.03e-01 | 100.0% | 88.5% |
| 3922986 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.81 | 70.0 | 7.15e-01 | 91.4% | 100.0% |
| 4933012 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.80 | 74.0 | 7.10e-01 | 100.0% | 92.5% |
| 3516105 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 75.0 | 6.83e-01 | 100.0% | 89.6% |
| 3972732 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.80 | 72.0 | 6.68e-01 | 100.0% | 78.3% |
| 5049040 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 67.0 | 6.72e-01 | 89.5% | 88.0% |
| 3502869 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.79 | 59.0 | 6.51e-01 | 77.1% | 98.8% |
| 4999539 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.78 | 72.0 | 6.81e-01 | 100.0% | 94.4% |
| 3782336 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.78 | 72.0 | 6.65e-01 | 100.0% | 82.3% |
| 3517572 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.78 | 72.0 | 7.00e-01 | 100.0% | 96.5% |
| 3320001 | 1.1.1.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_N | 0.77 | 72.0 | 6.29e-01 | 100.0% | 88.0% |
| 1070006 | 1.1.1.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › PE-PGRS_C | 0.76 | 70.0 | 5.13e-01 | 100.0% | 48.9% |
| 3820884 | 1.1.1.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_N | 0.75 | 59.0 | 5.06e-01 | 82.9% | 82.5% |
| 3178520 | 1.1.1.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N | 0.74 | 68.0 | 4.49e-01 | 100.0% | 38.6% |
| 3174998 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.74 | 68.0 | 4.52e-01 | 100.0% | 40.6% |
| 5041097 | 6043.1.1.0 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like | 0.57 | 28.0 | 3.49e-01 | 76.2% | 81.8% |
| 3770801 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.56 | 38.0 | 3.97e-01 | 74.3% | 76.8% |
| 3842362 | 1.1.5.76 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT | 0.55 | 39.0 | 4.06e-01 | 76.2% | 81.1% |