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IMGVR_UViG_3300014911_000568-3300014911-Ga0180301_1000612017

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300014911_000568-3300014911-Ga0180301_1000612017 ↗
Kingdom:: archaea

Quality

74.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-63

PDB

Domain cluster: representative

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2vy1A00	1.10.4180.10	Mainly Alpha › Orthogonal Bundle › Protein LEAFY › Protein LEAFY	0.69	54.0	3.80e-01	84.9%	31.9%
3r6nA02	1.20.58.1060	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.66	57.0	3.91e-01	90.6%	52.9%
3b0bB00	1.10.20.10	Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A	0.66	51.0	4.22e-01	86.8%	50.5%
1d8wC00	3.20.20.150	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes	0.64	55.0	3.25e-01	94.3%	47.4%
1b8bA00	3.20.70.20	Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain ›	0.61	54.0	3.12e-01	100.0%	41.1%
1pwuA04	3.40.390.10	Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain)	0.60	47.0	3.17e-01	88.7%	63.3%
1icrA00	3.40.109.10	Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase	0.59	45.0	2.99e-01	81.1%	28.7%
4gywA02	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.57	49.0	3.87e-01	98.1%	96.4%
4h63K00	1.10.287.3490	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.57	38.0	3.27e-01	71.7%	44.9%
2ckwA04	1.20.960.20	Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A ›	0.57	41.0	3.27e-01	77.4%	39.3%
4ejoA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.55	43.0	3.47e-01	88.7%	92.0%
1rr7A01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.55	38.0	4.07e-01	75.5%	84.8%
4p63D00	3.40.910.10	Alpha Beta › 3-Layer(aba) Sandwich › Deoxyhypusine Synthase › Deoxyhypusine synthase	0.54	42.0	2.72e-01	92.5%	23.7%
1fmjA00	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.52	34.0	2.20e-01	71.7%	17.5%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5040031	632.22.1.199 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › PLDc_N	0.85	58.0	4.86e-01	71.7%	47.1%
3276794	2006.1.4.5 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XRN_N	0.82	64.0	4.01e-01	84.9%	17.3%
3583102	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.80	54.0	4.64e-01	73.6%	46.3%
4644218	102.1.1.0 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like	0.70	58.0	4.88e-01	88.7%	67.1%
3518379	3502.1.1.1 ↗	alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein › YebG	0.64	48.0	4.75e-01	79.2%	87.3%
3520048	129.1.1.14 ↗	alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › DUF2520	0.59	50.0	3.92e-01	98.1%	64.3%
3966649	213.1.1.0 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat)	0.54	40.0	2.96e-01	83.0%	45.8%