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IMGVR_UViG_3300014911_000575-3300014911-Ga0180301_100074666
Arc-VirIMGVR_UViG_3300014911_000575-3300014911-Ga0180301_100074666
Identity
- Kingdom:
- archaea
Quality
89.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-168
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11667.15 best | DUF3267 | 40.0 | 6.00e-10 | 64.8% | 97.1% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.66 | 37.0 | 4.81e-01 | 80.6% | 98.9% |
| 1rwuA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 30.0 | 3.90e-01 | 96.4% | 81.6% |
| 1ml8A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.62 | 36.0 | 4.65e-01 | 71.5% | 99.0% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 32.0 | 4.00e-01 | 100.0% | 85.4% |
| 3zsuA00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.56 | 33.0 | 3.84e-01 | 81.2% | 80.5% |
| 3w7tA03 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.56 | 41.0 | 2.98e-01 | 73.3% | 37.4% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.55 | 31.0 | 3.71e-01 | 86.1% | 85.0% |
| 4fm3A00 | 1.20.1270.390 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.55 | 26.0 | 3.44e-01 | 78.2% | 78.9% |
| 2hroA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.55 | 35.0 | 3.89e-01 | 87.3% | 80.5% |
| 5ffdA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.54 | 36.0 | 3.88e-01 | 90.9% | 78.8% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 34.0 | 3.72e-01 | 98.8% | 77.0% |
| 2lu1A00 | 3.30.70.2370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 30.0 | 3.83e-01 | 77.0% | 100.0% |
| 1dpsA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 35.0 | 3.64e-01 | 98.8% | 69.8% |
| 3b8pA00 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.52 | 47.0 | 4.39e-01 | 98.8% | 95.2% |
| 6ks6q01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.51 | 45.0 | 3.87e-01 | 97.6% | 74.4% |
| 2fji101 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.51 | 36.0 | 3.32e-01 | 71.5% | 89.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4170819 | 4070.1.1.3 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › DUF3267 | 0.86 | 81.0 | 7.70e-01 | 100.0% | 85.3% |
| 4033997 | 4070.1.1.3 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › DUF3267 | 0.84 | 75.0 | 7.78e-01 | 96.4% | 99.4% |
| 5003422 | 4070.1.1.3 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › DUF3267 | 0.79 | 68.0 | 6.79e-01 | 100.0% | 88.2% |
| 3989008 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.75 | 56.0 | 5.60e-01 | 77.0% | 85.3% |
| 4990233 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.71 | 58.0 | 4.87e-01 | 83.6% | 77.7% |
| 4640051 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.70 | 57.0 | 5.48e-01 | 86.7% | 78.4% |
| 4984140 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.66 | 54.0 | 4.87e-01 | 85.5% | 72.7% |
| 5063438 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.65 | 43.0 | 4.21e-01 | 95.2% | 61.1% |
| 4981647 | 4070.1.1.4 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50B | 0.65 | 48.0 | 4.59e-01 | 85.5% | 67.0% |
| 3863014 | 109.23.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain in vacuolar protein sorting-associated protein 54 › C-terminal domain in vacuolar protein sorting-associated protein 54 › BCD_RFX | 0.63 | 36.0 | 3.78e-01 | 79.4% | 60.0% |
| 5056688 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.61 | 51.0 | 4.53e-01 | 88.5% | 74.5% |
| 3192289 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.60 | 38.0 | 3.77e-01 | 77.6% | 58.3% |
| 4973788 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.60 | 37.0 | 3.92e-01 | 72.7% | 68.3% |
| 5022668 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.59 | 35.0 | 3.76e-01 | 74.5% | 67.1% |
| 3929730 | 3236.1.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger | 0.57 | 48.0 | 3.53e-01 | 88.5% | 49.4% |
| 4995068 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.52 | 39.0 | 3.79e-01 | 77.6% | 88.9% |
| 3293843 | 5050.1.1.2 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › PTR2 | 0.51 | 44.0 | 3.07e-01 | 93.9% | 66.9% |
| 3285450 | 5050.1.1.55 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr, MFS_1 | 0.51 | 44.0 | 3.22e-01 | 93.9% | 38.7% |
| 4941160 | 1075.5.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt | 0.51 | 38.0 | 3.60e-01 | 77.0% | 81.5% |