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IMGVR_UViG_3300014913_000898-3300014913-Ga0164310_1000732011

Arc-Vir

IMGVR_UViG_3300014913_000898-3300014913-Ga0164310_1000732011

Identity

Kingdom:
archaea

Quality

66.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-59
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x8kA02 6.20.370.30 Special › Other non-globular › Rhinovirus 14, subunit 4 › 0.70 37.0 4.17e-01 71.1% 100.0%
4dzdA01 3.30.70.1200 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 0.69 46.0 4.04e-01 71.1% 95.7%
2fiaB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.65 49.0 3.37e-01 100.0% 23.9%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.63 48.0 3.62e-01 100.0% 33.1%
1o22A00 3.90.1000.10 Alpha Beta › Alpha-Beta Complex › Orphan Protein Tm0875; Chain: A; › Hypothetical protein TM0875 0.62 47.0 3.30e-01 84.4% 25.5%
7s5oA01 3.50.70.20 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › Cytochrome P460 0.61 52.0 3.75e-01 100.0% 42.9%
4urpA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.60 53.0 3.51e-01 100.0% 66.9%
1y9wA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 39.0 3.16e-01 100.0% 31.7%
2qecA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 50.0 3.32e-01 100.0% 30.6%
2q09A01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.55 43.0 3.38e-01 100.0% 38.8%
2w3sA05 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.54 40.0 3.18e-01 97.8% 36.5%
1bf5A04 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 37.0 3.03e-01 84.4% 72.6%
3h4qA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 45.0 3.17e-01 100.0% 34.5%
5dvhA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 41.0 2.88e-01 100.0% 34.6%
4fflA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 43.0 2.75e-01 100.0% 39.0%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3798258 109.21.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain 0.70 54.0 3.00e-01 100.0% 6.3%
3511356 4056.1.1.1 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6 0.68 47.0 3.58e-01 100.0% 31.4%
3468973 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 53.0 3.54e-01 100.0% 23.6%
4089923 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 44.0 2.79e-01 88.9% 13.2%
3256497 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.63 41.0 2.76e-01 75.6% 18.2%
3262850 3435.1.1.0 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.63 46.0 2.96e-01 77.8% 30.2%
7035 508.1.1.2 ↗ a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › DUF3855 0.62 47.0 3.30e-01 84.4% 25.5%
3401928 220.1.1.192 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP_C 0.60 47.0 3.35e-01 100.0% 28.3%
3263571 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 47.0 3.17e-01 100.0% 22.3%
3788003 220.1.1.112 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_10 0.59 48.0 3.38e-01 100.0% 28.3%
3462119 9.1.1.23 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3598_N 0.58 49.0 3.30e-01 97.8% 56.2%
3817782 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.58 42.0 3.04e-01 80.0% 62.1%
3571912 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.58 46.0 3.12e-01 100.0% 27.1%
3687023 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 42.0 3.35e-01 84.4% 42.0%
3499566 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 44.0 2.58e-01 100.0% 11.0%
3547167 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 43.0 3.04e-01 95.6% 36.5%
3283322 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.53 46.0 3.14e-01 100.0% 28.5%
5062512 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.52 38.0 2.95e-01 80.0% 71.4%
3867084 6070.1.1.0 ↗ few secondary structure elements › Sortilin C-terminal domain › Sortilin C-terminal domain › Sortilin C-terminal domain 0.52 40.0 4.23e-01 97.8% 97.5%
1890205 6.1.1.2 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Kunitz_legume 0.52 41.0 2.88e-01 100.0% 34.6%
3545942 5.1.11.11 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 0.51 36.0 2.18e-01 82.2% 23.6%
3938896 508.1.1.0 ↗ a+b three layers › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain › Protein interacting with HSP90 1 (Pih1) N-terminal domain 0.51 34.0 2.91e-01 80.0% 84.8%