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IMGVR_UViG_3300014913_000948-3300014913-Ga0164310_100077166

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300014913_000948-3300014913-Ga0164310_100077166 ↗
Kingdom:: archaea

Quality

75.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-75

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2l2oA00	1.10.10.1540	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain	0.59	46.0	4.44e-01	90.1%	90.6%
7r7eA01	3.30.300.30	Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain	0.56	46.0	3.92e-01	93.0%	75.6%
2krhA00	1.10.10.1540	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain	0.54	46.0	4.43e-01	100.0%	91.8%
4mz0B05	3.30.70.250	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding	0.53	42.0	4.37e-01	93.0%	94.0%
3d0sA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.53	42.0	4.11e-01	90.1%	88.7%
2fmyA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	41.0	4.03e-01	91.5%	89.0%
3oq2A00	3.30.70.240	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.52	43.0	3.92e-01	94.4%	92.9%
1wkiA01	3.90.1170.10	Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Ribosomal protein L16/L10	0.52	42.0	3.74e-01	94.4%	75.2%
3c1dB01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	39.0	4.13e-01	88.7%	98.4%
4nuuB02	1.20.58.830	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.51	38.0	3.22e-01	80.3%	85.4%
4krgA01	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.51	44.0	3.01e-01	95.8%	48.6%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
143797	101.1.2.149 ↗	alpha arrays › HTH › HTH › winged helix domain › Costars	0.59	47.0	4.60e-01	91.5%	95.1%
4123654	2004.1.1.198 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23	0.56	48.0	3.03e-01	94.4%	36.7%
3606213	109.4.1.21 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ENTH	0.56	39.0	3.12e-01	74.6%	69.7%
3844936	101.1.1.273 ↗	alpha arrays › HTH › HTH › Three-helical HTH › PF26094	0.55	44.0	4.40e-01	91.5%	96.0%
3603735	242.1.1.0 ↗	a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases	0.55	43.0	3.43e-01	87.3%	44.7%
3606280	108.1.1.30 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8	0.54	43.0	3.21e-01	90.1%	46.3%
4519317	304.56.1.2 ↗	a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2	0.54	44.0	4.19e-01	95.8%	76.5%
3183643	243.9.1.4 ↗	a+b two layers › Cystatin-like › Nuclease A inhibitor (NuiA)-related › Nuclease A inhibitor (NuiA)-related › NuiA_2	0.51	44.0	3.80e-01	100.0%	92.4%
4540137	2004.1.1.585 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15, AAA_21, AAA_23	0.51	42.0	2.72e-01	94.4%	36.7%
4382855	101.1.2.451 ↗	alpha arrays › HTH › HTH › winged helix domain › NPR3	0.50	39.0	3.48e-01	93.0%	59.0%