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IMGVR_UViG_3300014914_000499-3300014914-Ga0164311_1000021237

Arc-Vir

IMGVR_UViG_3300014914_000499-3300014914-Ga0164311_1000021237

Quality

71.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-64
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.67 56.0 4.29e-01 93.2% 75.0%
4emoC00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 53.0 4.39e-01 93.2% 75.0%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 52.0 5.48e-01 96.6% 100.0%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.65 48.0 4.37e-01 100.0% 58.7%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 4.94e-01 94.9% 82.3%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 43.0 4.66e-01 94.9% 93.5%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 45.0 3.48e-01 78.0% 83.3%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.61 53.0 4.88e-01 98.3% 89.5%
1h4rA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 51.0 4.42e-01 93.2% 80.2%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.52e-01 94.9% 67.5%
4l8hB00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.60 43.0 3.48e-01 78.0% 52.0%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.45e-01 96.6% 65.1%
2x45A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 50.0 3.91e-01 100.0% 55.6%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 47.0 4.82e-01 96.6% 94.7%
6eotD01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.58 42.0 2.49e-01 79.7% 17.0%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.58 48.0 4.50e-01 94.9% 90.5%
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.57 47.0 3.82e-01 96.6% 47.6%
1e2rA02 2.140.10.20 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 0.57 47.0 2.87e-01 94.9% 83.8%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.57 42.0 3.98e-01 88.1% 66.2%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.57 44.0 3.59e-01 94.9% 42.4%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.57 46.0 4.26e-01 96.6% 79.5%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 45.0 3.90e-01 89.8% 69.5%
8cukB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 45.0 2.86e-01 91.5% 90.1%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 44.0 3.57e-01 91.5% 91.5%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 41.0 3.98e-01 88.1% 70.1%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 44.0 2.72e-01 89.8% 64.2%
3pubA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 47.0 3.50e-01 98.3% 93.8%
3u2gA02 2.60.98.40 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain 0.56 47.0 3.76e-01 100.0% 68.2%
1hp7A01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.55 44.0 3.84e-01 89.8% 71.6%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 45.0 4.47e-01 94.9% 95.3%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 38.0 4.00e-01 84.7% 89.8%
1xdiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 44.0 3.10e-01 94.9% 93.6%
2nutA03 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.54 43.0 2.89e-01 91.5% 77.2%
2iw3A05 2.40.50.990 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 42.0 3.61e-01 93.2% 56.9%
2x5gA00 3.30.720.60 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.54 39.0 3.47e-01 79.7% 61.5%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 42.0 4.07e-01 91.5% 81.7%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 41.0 3.12e-01 89.8% 63.7%
2aujD03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 42.0 4.22e-01 89.8% 87.1%
4r9iA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 43.0 3.70e-01 93.2% 92.0%
3mcaB01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.52 40.0 3.62e-01 93.2% 67.7%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 43.0 4.35e-01 96.6% 98.3%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 42.0 3.43e-01 94.9% 97.5%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 44.0 3.29e-01 98.3% 48.1%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 40.0 4.09e-01 91.5% 96.6%
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 40.0 3.68e-01 88.1% 87.8%
1noyA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.52 39.0 3.11e-01 86.4% 67.9%
4glaC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 40.0 3.59e-01 89.8% 86.5%
2xp1A02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 45.0 4.08e-01 100.0% 90.0%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 44.0 3.73e-01 100.0% 71.2%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1177147 220.1.1.41 beta barrels › PH domain-like › PH domain-like › PH domain-like › Sharpin_PH 0.66 53.0 4.38e-01 93.2% 74.4%
3928430 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.66 52.0 4.96e-01 89.8% 85.7%
4224041 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.65 57.0 5.30e-01 100.0% 78.7%
3451171 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 50.0 4.88e-01 96.6% 78.5%
4396749 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.64 53.0 5.01e-01 100.0% 77.3%
4354167 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.64 55.0 5.02e-01 100.0% 73.8%
4022025 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.63 50.0 3.82e-01 96.6% 36.6%
4932609 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 49.0 4.79e-01 94.9% 78.5%
3174977 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.62 46.0 3.94e-01 96.6% 49.5%
4075769 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.62 45.0 4.66e-01 94.9% 85.5%
4105440 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.62 52.0 5.01e-01 100.0% 84.3%
3344796 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 50.0 4.51e-01 96.6% 65.1%
4159881 220.1.1.197 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 0.61 51.0 4.49e-01 98.3% 97.9%
3197066 5.1.4.116 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 0.61 49.0 3.01e-01 91.5% 95.1%
3448975 4.1.1.66 beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.61 51.0 5.00e-01 96.6% 89.2%
3482225 4.1.1.300 beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.61 51.0 3.98e-01 94.9% 83.1%
3301015 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 51.0 4.99e-01 96.6% 89.2%
3737837 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 53.0 5.17e-01 98.3% 92.3%
3926118 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.60 49.0 4.88e-01 98.3% 90.0%
3577380 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.60 43.0 4.12e-01 79.7% 65.7%
3393233 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 51.0 3.29e-01 96.6% 34.6%
5079117 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 44.0 2.87e-01 81.4% 99.3%
3751502 4.1.1.365 beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C 0.60 47.0 4.52e-01 94.9% 74.3%
4109416 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.60 49.0 4.73e-01 100.0% 82.9%
4027263 4.1.1.104 beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.60 49.0 3.97e-01 94.9% 90.8%
4959167 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 41.0 4.01e-01 86.4% 67.7%
3207081 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 50.0 4.88e-01 96.6% 95.4%
3487837 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 49.0 3.50e-01 100.0% 69.5%
3395150 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 46.0 4.62e-01 96.6% 88.3%
3744781 109.4.1.69 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IKI3 0.58 51.0 3.26e-01 100.0% 23.3%
3964664 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.58 44.0 4.29e-01 91.5% 75.0%
4218488 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.57 48.0 4.38e-01 94.9% 76.2%
5012319 3794.1.2.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase 0.57 49.0 4.39e-01 100.0% 85.9%
3578208 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 41.0 4.26e-01 94.9% 89.1%
3703932 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 44.0 4.42e-01 96.6% 88.3%
3566631 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 46.0 4.25e-01 94.9% 76.2%
3482359 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 47.0 3.92e-01 96.6% 76.4%
3806681 5.1.5.96 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 0.56 48.0 3.13e-01 100.0% 21.4%
4832974 4.1.1.15 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L6e 0.56 40.0 3.93e-01 84.7% 71.9%
3651091 5.1.4.15 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 0.56 43.0 2.62e-01 89.8% 66.6%
4000858 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 47.0 4.47e-01 96.6% 90.0%
5019700 5090.1.1.6 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S-layer 0.55 47.0 4.04e-01 100.0% 75.0%
4578663 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 44.0 4.22e-01 89.8% 85.7%
3920631 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 43.0 2.59e-01 89.8% 84.9%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 41.0 4.19e-01 96.6% 87.9%
3735753 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 48.0 2.66e-01 100.0% 7.8%
3231154 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 43.0 4.01e-01 93.2% 92.5%
4147969 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.55 38.0 3.48e-01 76.3% 90.6%
5044389 4.26.1.0 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.54 41.0 4.28e-01 91.5% 98.0%
5044391 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 40.0 4.22e-01 91.5% 98.0%
4079201 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.54 40.0 3.37e-01 94.9% 44.5%
3967128 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.53 42.0 4.05e-01 91.5% 77.1%
5044394 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 36.0 3.88e-01 74.6% 93.3%
5044392 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 41.0 4.23e-01 89.8% 96.4%
4646663 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.52 40.0 3.17e-01 88.1% 43.7%
3606311 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 40.0 3.80e-01 89.8% 81.3%
4966092 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.51 37.0 3.10e-01 91.5% 40.3%
4049072 2.4.1.6 beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.51 41.0 3.47e-01 94.9% 50.9%
3273505 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.50 40.0 3.68e-01 91.5% 68.8%