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IMGVR_UViG_3300014934_000024-3300014934-Ga0169773_1017706
Arc-VirIMGVR_UViG_3300014934_000024-3300014934-Ga0169773_1017706
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-85
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fgxA00 | 3.30.2220.10 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171 | 0.72 | 63.0 | 5.93e-01 | 100.0% | 80.2% |
| 3kluA01 | 3.30.2220.30 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › | 0.70 | 62.0 | 5.66e-01 | 100.0% | 90.9% |
| 1vchD00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 41.0 | 3.17e-01 | 100.0% | 31.2% |
| 3vbbE01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.58 | 38.0 | 3.35e-01 | 81.5% | 45.4% |
| 4g09A03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.57 | 27.0 | 3.16e-01 | 98.8% | 61.8% |
| 1kq4A00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.53 | 44.0 | 3.44e-01 | 100.0% | 92.1% |
| 4jzsA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 45.0 | 3.70e-01 | 100.0% | 96.2% |
| 3f5cB00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.51 | 42.0 | 3.40e-01 | 97.5% | 90.7% |
| 3r0vA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 43.0 | 3.10e-01 | 97.5% | 62.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3968270 | 3103.1.1.2 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_13 | 0.76 | 69.0 | 6.20e-01 | 100.0% | 82.7% |
| 185252 | 3547.1.1.1 ↗ | a+b two layers › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › DUF6848 | 0.72 | 63.0 | 5.93e-01 | 100.0% | 80.2% |
| 333304 | 6050.1.1.1 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage_TAC_1 | 0.72 | 65.0 | 5.95e-01 | 100.0% | 81.7% |
| 3952795 | 3892.1.1.1 ↗ | alpha bundles › Transhydrogeanse domain II › Transhydrogeanse domain II › Transhydrogeanse domain II › PNTB | 0.56 | 40.0 | 2.83e-01 | 76.5% | 68.2% |
| 4671846 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.55 | 31.0 | 3.31e-01 | 100.0% | 64.3% |
| 4979327 | 1118.1.1.0 ↗ | a+b complex topology › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain | 0.53 | 44.0 | 3.76e-01 | 100.0% | 57.6% |
| 3974274 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.53 | 45.0 | 3.17e-01 | 98.8% | 57.9% |
| 4955348 | 244.3.1.4 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › Lip_prot_lig_C | 0.52 | 45.0 | 4.46e-01 | 96.3% | 100.0% |
| 3600158 | 1118.1.1.1 ↗ | a+b complex topology › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › NFACT-R_1 | 0.52 | 41.0 | 3.43e-01 | 100.0% | 50.4% |
| 3193271 | 1118.1.1.1 ↗ | a+b complex topology › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › NFACT-R_1 | 0.51 | 45.0 | 3.74e-01 | 100.0% | 57.8% |
| 5065172 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.50 | 44.0 | 3.46e-01 | 98.8% | 67.4% |
D2
medium
residues 90-134_224-244
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xjhA00 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.55 | 38.0 | 3.90e-01 | 92.4% | 77.4% |
| 8hnzA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 41.0 | 2.59e-01 | 90.9% | 68.5% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.51 | 35.0 | 3.74e-01 | 87.9% | 86.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4465307 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 39.0 | 4.39e-01 | 100.0% | 76.0% |
| 3785389 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.63 | 40.0 | 4.33e-01 | 98.5% | 78.2% |
| 4011699 | 4224.1.1.0 ↗ | few secondary structure elements › CHY zinc finger › CHY zinc finger › CHY zinc finger | 0.56 | 31.0 | 3.32e-01 | 77.3% | 61.7% |
| 4478971 | 4.1.1.174 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF951 | 0.56 | 37.0 | 3.81e-01 | 100.0% | 70.8% |
| 3188373 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.52 | 41.0 | 2.51e-01 | 92.4% | 91.8% |
| 4291714 | 304.55.2.7 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › tRNA_synt_2f | 0.51 | 36.0 | 2.57e-01 | 75.8% | 55.2% |
| 4994020 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.51 | 26.0 | 2.80e-01 | 95.5% | 51.7% |
| 5070516 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.50 | 22.0 | 2.35e-01 | 75.8% | 36.7% |
D3
medium
residues 143-219
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2af5A01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.64 | 38.0 | 4.31e-01 | 97.4% | 83.3% |
| 2ob9A00 | 3.30.2220.20 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like | 0.60 | 51.0 | 4.68e-01 | 100.0% | 85.0% |
| 3qktD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 46.0 | 3.08e-01 | 100.0% | 22.3% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.56 | 38.0 | 3.28e-01 | 71.4% | 61.2% |
| 2greA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.56 | 41.0 | 2.91e-01 | 77.9% | 93.2% |
| 8dajA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 45.0 | 3.03e-01 | 98.7% | 35.8% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.50 | 39.0 | 3.34e-01 | 83.1% | 53.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5084015 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.64 | 57.0 | 5.66e-01 | 100.0% | 97.5% |
| 3444177 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 36.0 | 3.63e-01 | 71.4% | 57.5% |
| 5004274 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.60 | 38.0 | 3.84e-01 | 97.4% | 64.0% |
| 3401675 | 10.12.1.53 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 | 0.57 | 41.0 | 2.95e-01 | 76.6% | 65.4% |
| 3328479 | 213.1.1.51 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FemAB_like | 0.55 | 49.0 | 3.57e-01 | 100.0% | 67.6% |
| 3838009 | 1118.1.1.2 ↗ | a+b complex topology › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › NFACT-R_2 | 0.54 | 43.0 | 4.04e-01 | 100.0% | 69.5% |
| 3884680 | 292.2.1.6 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › DUF4520 | 0.54 | 46.0 | 4.20e-01 | 100.0% | 71.8% |
| 3420734 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.53 | 38.0 | 2.75e-01 | 76.6% | 90.2% |
| 4990392 | 1118.1.1.1 ↗ | a+b complex topology › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › NFACT-R_1 | 0.52 | 42.0 | 3.08e-01 | 100.0% | 31.8% |
| 4979327 | 1118.1.1.0 ↗ | a+b complex topology › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain | 0.52 | 45.0 | 3.77e-01 | 100.0% | 56.8% |
| 3600158 | 1118.1.1.1 ↗ | a+b complex topology › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › Anchorless fibronectin/fibrinogen binding protein C-terminal domain › NFACT-R_1 | 0.51 | 41.0 | 3.42e-01 | 100.0% | 49.6% |
| 3198542 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 36.0 | 2.53e-01 | 74.0% | 34.2% |
| 3668463 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.51 | 35.0 | 2.62e-01 | 74.0% | 74.2% |
| 3967558 | 306.6.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › CT_C_D | 0.50 | 35.0 | 3.39e-01 | 100.0% | 64.7% |