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IMGVR_UViG_3300014934_000039-3300014934-Ga0169773_1009333
Arc-VirIMGVR_UViG_3300014934_000039-3300014934-Ga0169773_1009333
Identity
- Kingdom:
- archaea
Quality
82.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-40
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hjqA01 | 3.40.5.20 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › YqbF domain | 0.75 | 58.0 | 5.39e-01 | 100.0% | 67.4% |
| 3ttyA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 46.0 | 4.06e-01 | 94.1% | 74.2% |
| 3v64C01 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.61 | 30.0 | 3.12e-01 | 88.2% | 48.4% |
| 4oifA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 44.0 | 3.89e-01 | 91.2% | 71.0% |
| 5i0fB04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 45.0 | 3.73e-01 | 100.0% | 40.5% |
| 2f2hA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 44.0 | 4.22e-01 | 100.0% | 70.8% |
| 4ba0A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 40.0 | 3.87e-01 | 100.0% | 70.6% |
| 1iv8A05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 36.0 | 3.31e-01 | 100.0% | 47.0% |
| 5aj3Q00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 41.0 | 3.07e-01 | 100.0% | 62.4% |
| 2wdqA04 | 4.10.80.40 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain | 0.51 | 30.0 | 2.97e-01 | 94.1% | 41.5% |
| 2hoxA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 35.0 | 2.76e-01 | 91.2% | 87.6% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1933549 | 12.1.1.50 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_31_3rd | 0.61 | 47.0 | 3.80e-01 | 100.0% | 40.5% |
| 3241473 | 12.1.1.50 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_31_3rd | 0.61 | 45.0 | 3.71e-01 | 100.0% | 42.4% |
| 4022161 | 101.1.2.703 ↗ | alpha arrays › HTH › HTH › winged helix domain › Methyltransf_PK | 0.61 | 42.0 | 3.13e-01 | 76.5% | 85.0% |
| 4059345 | 12.1.1.50 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_31_3rd | 0.59 | 44.0 | 3.65e-01 | 100.0% | 42.5% |
| None | — | 0.58 | 40.0 | 2.51e-01 | 76.5% | 37.0% | |
| 3481107 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.56 | 40.0 | 3.39e-01 | 100.0% | 40.0% |
| 4031645 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.56 | 40.0 | 3.78e-01 | 100.0% | 60.0% |
| 3526067 | 376.1.2.17 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM+PET | 0.51 | 39.0 | 2.65e-01 | 97.1% | 36.6% |
| 5041477 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.50 | 35.0 | 3.19e-01 | 76.5% | 45.0% |
| 5026031 | 12.1.1.50 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_31_3rd | 0.50 | 35.0 | 3.07e-01 | 100.0% | 41.2% |