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IMGVR_UViG_3300015214_000248-3300015214-Ga0172382_100060011

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300015214_000248-3300015214-Ga0172382_100060011 ↗
Kingdom:: archaea

Quality

50.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 133-237

PDB

Domain cluster: representative

CATH (15)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3c0kA02	3.30.750.80	Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › RNA methyltransferase domain (HRMD) like	0.61	45.0	4.44e-01	77.1%	77.1%
2b78A02	3.30.750.80	Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › RNA methyltransferase domain (HRMD) like	0.61	46.0	4.71e-01	81.0%	84.3%
4q0jA03	3.30.450.270	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain	0.60	44.0	4.06e-01	79.0%	100.0%
2l72A00	3.40.20.10	Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin	0.57	43.0	4.22e-01	81.9%	90.7%
2rrlA01	3.30.750.140	Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA ›	0.56	46.0	4.51e-01	95.2%	82.6%
1e6vB02	1.20.840.10	Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal	0.55	48.0	3.55e-01	97.1%	90.0%
3l50A00	3.40.20.10	Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin	0.54	41.0	3.80e-01	81.9%	87.5%
2lxxA00	3.40.20.10	Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin	0.53	41.0	3.68e-01	82.9%	85.5%
4a8eA01	1.10.150.130	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain	0.53	40.0	4.35e-01	93.3%	97.7%
7qprA02	3.30.460.10	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2	0.53	40.0	3.75e-01	81.0%	88.1%
5xukA00	3.90.470.20	Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain	0.53	39.0	3.84e-01	78.1%	99.1%
3mogA03	3.30.750.190	Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA ›	0.53	39.0	4.11e-01	86.7%	88.3%
2wasA00	3.90.470.20	Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain	0.52	38.0	3.79e-01	78.1%	86.7%
2jifA01	1.10.540.10	Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain	0.52	41.0	4.01e-01	86.7%	79.7%
3i8bA01	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.51	42.0	3.20e-01	94.3%	49.8%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3942252	3261.1.1.8 ↗	a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › DUF2612	0.76	68.0	6.68e-01	100.0%	92.7%
3986979	1049.2.1.2 ↗	alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Phage_Wedge1	0.73	66.0	5.80e-01	100.0%	68.8%
3500879	327.11.1.9 ↗	a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › Phage_Wedge1	0.71	51.0	5.51e-01	78.1%	91.8%
5008101	873.1.1.0 ↗	a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain	0.62	48.0	4.76e-01	83.8%	79.1%
5028435	4040.1.1.1 ↗	alpha bundles › Fic-like › Fic-like › Fic-like › Fic	0.59	49.0	3.73e-01	92.4%	75.8%
4530661	3186.1.1.5 ↗	a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › HpaP	0.57	41.0	4.44e-01	76.2%	100.0%

D2 medium residues 335-394

PDB