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IMGVR_UViG_3300015214_002962-3300015214-Ga0172382_1000656217

Arc-Vir

IMGVR_UViG_3300015214_002962-3300015214-Ga0172382_1000656217

Quality

64.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-104
PDB
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.75 60.0 6.29e-01 100.0% 94.6%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 43.0 4.83e-01 100.0% 76.2%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.68 45.0 4.41e-01 100.0% 62.2%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 56.0 5.05e-01 100.0% 77.2%
2k50A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 57.0 5.27e-01 100.0% 82.7%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 37.0 4.11e-01 100.0% 76.2%
4jbmB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 53.0 5.09e-01 100.0% 82.3%
1fguB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 53.0 4.94e-01 100.0% 87.6%
2e2dC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 54.0 5.18e-01 100.0% 95.7%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 38.0 4.42e-01 70.7% 98.2%
2k5vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 51.0 4.86e-01 100.0% 81.6%
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 42.0 3.68e-01 78.0% 90.3%
1ae2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 51.0 5.09e-01 98.8% 100.0%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 44.0 4.14e-01 81.7% 93.0%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 39.0 3.94e-01 84.1% 69.0%
1pfsA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 48.0 4.93e-01 100.0% 98.7%
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 48.0 4.80e-01 100.0% 95.1%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.56 50.0 4.09e-01 100.0% 55.6%
5l37C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.56 47.0 4.66e-01 98.8% 89.5%
8c5yA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 50.0 3.96e-01 100.0% 82.4%
4dduA07 2.60.510.20 Mainly Beta › Sandwich › EV matrix protein fold › 0.54 41.0 3.84e-01 82.9% 85.0%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.54 42.0 3.79e-01 87.8% 87.6%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 44.0 4.09e-01 92.7% 95.3%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 40.0 2.58e-01 85.4% 50.7%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 43.0 3.91e-01 93.9% 87.9%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 41.0 3.82e-01 89.0% 96.4%
1r0mA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 43.0 3.76e-01 93.9% 70.0%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.52 27.0 3.27e-01 74.4% 81.2%
1uzxA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.52 44.0 3.73e-01 95.1% 65.7%
2khxA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 33.0 3.42e-01 70.7% 68.4%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 40.0 3.73e-01 86.6% 93.4%
1jpdX01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 42.0 4.01e-01 92.7% 86.9%
3mwcA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 42.0 3.64e-01 93.9% 75.6%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 45.0 3.79e-01 100.0% 79.4%
3gd6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 40.0 3.48e-01 91.5% 66.2%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 35.0 3.05e-01 74.4% 84.5%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4956351 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 59.0 3.69e-01 100.0% 18.5%
4975881 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 60.0 5.09e-01 100.0% 63.7%
4954091 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.66 59.0 5.21e-01 100.0% 71.7%
5032200 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.66 58.0 5.41e-01 100.0% 82.9%
4985272 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.66 59.0 5.43e-01 100.0% 84.8%
5066014 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.65 58.0 4.84e-01 100.0% 60.0%
5074491 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.65 57.0 5.02e-01 100.0% 71.2%
4022560 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 57.0 4.54e-01 100.0% 54.7%
4975880 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 57.0 5.11e-01 100.0% 75.7%
3583095 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 58.0 5.44e-01 100.0% 93.0%
5041942 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.64 57.0 5.10e-01 100.0% 74.8%
4927936 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 56.0 5.59e-01 97.6% 100.0%
5036294 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 56.0 5.32e-01 100.0% 87.0%
4975879 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 57.0 5.17e-01 100.0% 79.1%
4948168 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 57.0 5.19e-01 100.0% 79.1%
4015435 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.63 57.0 5.41e-01 100.0% 96.8%
5064437 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 57.0 5.17e-01 100.0% 77.3%
4975882 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 56.0 5.10e-01 100.0% 78.2%
3788514 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 48.0 3.86e-01 81.7% 82.5%
4951393 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 56.0 5.24e-01 100.0% 86.0%
4942076 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 56.0 5.02e-01 100.0% 79.1%
5081844 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 56.0 4.92e-01 100.0% 74.2%
5062351 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 56.0 5.00e-01 100.0% 77.4%
3577911 220.1.1.15 beta barrels › PH domain-like › PH domain-like › PH domain-like › BBL5 0.62 45.0 3.77e-01 76.8% 46.9%
5035149 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 55.0 5.30e-01 100.0% 90.5%
5051437 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 55.0 5.11e-01 100.0% 83.8%
4982872 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 55.0 5.02e-01 100.0% 79.1%
5066012 2.1.1.123 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3 0.62 55.0 5.01e-01 100.0% 80.9%
3743261 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 54.0 4.80e-01 100.0% 73.3%
5051436 2.1.1.123 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3 0.62 55.0 4.79e-01 100.0% 71.2%
5065884 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 52.0 4.51e-01 100.0% 60.8%
5035148 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.61 54.0 4.44e-01 100.0% 57.4%
5057108 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.61 55.0 4.90e-01 100.0% 74.8%
3741507 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.61 54.0 5.08e-01 100.0% 96.0%
5058143 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 54.0 4.94e-01 100.0% 80.0%
4931879 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.61 54.0 5.11e-01 100.0% 87.0%
4967296 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.61 54.0 5.07e-01 100.0% 87.0%
4985271 2.1.1.111 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.61 54.0 5.03e-01 100.0% 81.9%
5020457 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 54.0 4.92e-01 100.0% 80.0%
5004284 2.1.1.111 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.60 54.0 4.35e-01 100.0% 67.5%
4853066 2.1.1.22 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN 0.60 52.0 4.75e-01 100.0% 71.7%
5076489 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.60 53.0 4.81e-01 100.0% 76.5%
4929019 2.1.1.111 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.60 53.0 5.08e-01 100.0% 87.4%
5004106 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 53.0 4.80e-01 100.0% 75.7%
3596066 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 44.0 3.85e-01 78.0% 68.8%
4930095 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.60 54.0 4.88e-01 100.0% 78.2%
3907753 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 52.0 4.81e-01 100.0% 74.5%
5020458 2.1.1.111 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.60 53.0 4.86e-01 100.0% 80.0%
3670182 2.1.1.1 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.60 50.0 4.41e-01 93.9% 68.8%
3412668 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.59 44.0 3.90e-01 79.3% 95.0%
4931877 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 52.0 4.77e-01 100.0% 80.0%
5020459 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 53.0 4.97e-01 100.0% 87.9%
5016163 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 52.0 4.78e-01 100.0% 78.2%
3706903 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.59 44.0 3.66e-01 81.7% 88.9%
4953069 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.59 52.0 4.56e-01 100.0% 65.6%
5020456 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 52.0 4.73e-01 100.0% 79.1%
5004108 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 52.0 4.90e-01 100.0% 87.0%
5058918 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 51.0 4.60e-01 100.0% 70.4%
4974920 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.58 52.0 4.88e-01 100.0% 87.0%
4459672 264.2.1.1 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.58 44.0 3.66e-01 82.9% 84.7%
4951392 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 51.0 4.23e-01 100.0% 54.7%
3408101 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.58 42.0 3.67e-01 79.3% 80.7%
4981503 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.57 50.0 4.83e-01 100.0% 90.5%
3648413 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 35.0 3.48e-01 79.3% 56.7%
3478366 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.57 42.0 3.89e-01 78.0% 94.3%
4982481 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 51.0 4.89e-01 100.0% 87.4%
4942656 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.56 43.0 4.08e-01 82.9% 95.0%
4930094 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.55 49.0 4.56e-01 100.0% 80.0%
5030959 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.55 44.0 4.45e-01 97.6% 88.7%
5005180 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.55 42.0 3.68e-01 82.9% 88.0%
5042375 2.26.1.1 beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 0.54 45.0 4.64e-01 97.6% 100.0%
3602503 264.2.1.1 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.54 41.0 3.64e-01 82.9% 87.5%
3881440 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.54 39.0 3.50e-01 79.3% 88.8%
3993280 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.53 40.0 3.53e-01 81.7% 88.0%
4995163 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.53 34.0 2.54e-01 70.7% 22.1%
3590584 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.53 38.0 3.34e-01 79.3% 85.2%
3251342 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.52 44.0 3.99e-01 97.6% 100.0%
3921426 264.2.1.1 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.52 39.0 3.43e-01 81.7% 85.4%
5844 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.52 43.0 3.89e-01 93.9% 77.8%
5071482 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.51 39.0 3.45e-01 82.9% 88.0%
3614844 220.1.1.15 beta barrels › PH domain-like › PH domain-like › PH domain-like › BBL5 0.51 42.0 3.60e-01 98.8% 55.7%
4936010 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.50 38.0 2.61e-01 82.9% 81.5%