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IMGVR_UViG_3300016263_000587-3300016263-Ga0185526_1064924

Arc-Vir

IMGVR_UViG_3300016263_000587-3300016263-Ga0185526_1064924

Quality

75.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 20-84
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1j8bA00 3.30.1310.10 Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain 0.68 56.0 4.90e-01 92.3% 62.0%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.52 36.0 3.21e-01 76.9% 48.5%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3212403 3877.1.1.1 alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP 0.74 51.0 3.39e-01 72.3% 18.8%
4618205 604.1.1.150 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28954 0.69 58.0 4.60e-01 89.2% 96.7%
3685996 208.1.1.1 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep 0.63 49.0 3.52e-01 86.2% 49.2%
3809581 325.1.6.4 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase 0.58 43.0 2.74e-01 78.5% 24.4%
3693975 186.2.1.1 alpha arrays › lambda integrase-N-like › VEFS domain › VEFS domain › VEFS-Box 0.57 39.0 3.17e-01 98.5% 35.4%
3237750 101.1.2.303 alpha arrays › HTH › HTH › winged helix domain › RPC5 0.57 39.0 3.50e-01 72.3% 52.2%
3359932 101.1.11.3 alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP 0.56 40.0 4.04e-01 78.5% 95.4%
3506230 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 39.0 2.71e-01 81.5% 31.4%