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IMGVR_UViG_3300016263_000587-3300016263-Ga0185526_1064924
Arc-VirIMGVR_UViG_3300016263_000587-3300016263-Ga0185526_1064924
Identity
- Kingdom:
- archaea
Quality
75.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 20-84
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j8bA00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.68 | 56.0 | 4.90e-01 | 92.3% | 62.0% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.52 | 36.0 | 3.21e-01 | 76.9% | 48.5% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3212403 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.74 | 51.0 | 3.39e-01 | 72.3% | 18.8% |
| 4618205 | 604.1.1.150 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28954 | 0.69 | 58.0 | 4.60e-01 | 89.2% | 96.7% |
| 3685996 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.63 | 49.0 | 3.52e-01 | 86.2% | 49.2% |
| 3809581 | 325.1.6.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase | 0.58 | 43.0 | 2.74e-01 | 78.5% | 24.4% |
| 3693975 | 186.2.1.1 ↗ | alpha arrays › lambda integrase-N-like › VEFS domain › VEFS domain › VEFS-Box | 0.57 | 39.0 | 3.17e-01 | 98.5% | 35.4% |
| 3237750 | 101.1.2.303 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPC5 | 0.57 | 39.0 | 3.50e-01 | 72.3% | 52.2% |
| 3359932 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.56 | 40.0 | 4.04e-01 | 78.5% | 95.4% |
| 3506230 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 39.0 | 2.71e-01 | 81.5% | 31.4% |