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IMGVR_UViG_3300016457_001358-3300016457-Ga0186713_11630033

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300016457_001358-3300016457-Ga0186713_11630033 ↗
Kingdom:: archaea

Quality

84.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-74

PDB

Domain cluster: representative

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2mh3A00	4.10.280.10	Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain	0.74	55.0	5.64e-01	81.1%	82.9%
4g6dB02	6.10.140.1800	Special › Helix non-globular › Helix Hairpins ›	0.71	50.0	4.91e-01	74.3%	70.4%
3um7A03	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.71	52.0	4.62e-01	77.0%	70.9%
2a19A02	1.10.150.190	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2	0.70	50.0	4.81e-01	75.7%	100.0%
3s5tA01	3.30.565.40	Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like	0.69	42.0	3.28e-01	77.0%	29.4%
2ahoB02	1.10.150.190	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2	0.68	51.0	4.77e-01	79.7%	97.8%
6ynwH01	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.67	43.0	4.34e-01	70.3%	64.9%
2ze7A02	1.10.287.890	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain	0.67	48.0	4.35e-01	75.7%	84.3%
3u3iA02	1.20.58.1110	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.66	50.0	4.39e-01	79.7%	89.8%
2cdqA02	1.20.120.1320	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain	0.63	44.0	4.06e-01	74.3%	87.6%
1aipH03	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.58	37.0	4.25e-01	71.6%	90.4%
2m35A00	1.10.60.50	Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 ›	0.58	39.0	4.50e-01	71.6%	100.0%
4px7A00	1.20.144.10	Mainly Alpha › Up-down Bundle › Vanadium-containing Chloroperoxidase; domain 1 › Phosphatidic acid phosphatase type 2/haloperoxidase	0.57	44.0	3.07e-01	85.1%	83.3%
1xb2B01	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.54	36.0	3.95e-01	75.7%	86.7%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3180974	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.81	39.0	4.52e-01	75.7%	63.6%
3400498	105.1.1.1 ↗	alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › HLH	0.73	65.0	5.52e-01	100.0%	93.3%
4210840	4082.1.1.0 ↗	alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain	0.69	56.0	4.91e-01	91.9%	59.1%
3889743	105.1.1.1 ↗	alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › HLH	0.62	47.0	4.40e-01	85.1%	64.2%
3728941	1174.1.1.2 ↗	alpha complex topology › Potassium channel TMEM175 › Potassium channel TMEM175 › Potassium channel TMEM175 › LtrA	0.60	48.0	3.60e-01	86.5%	48.6%
4315800	2004.1.1.72 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IPT	0.59	45.0	3.23e-01	85.1%	33.2%