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IMGVR_UViG_3300016457_001358-3300016457-Ga0186713_11630070
Arc-VirIMGVR_UViG_3300016457_001358-3300016457-Ga0186713_11630070
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-235
Domain cluster:
rep: OP830906.1__WBF78058.1__MEP401_gp05__00005__D296-546
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2joqA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 25.0 | 4.32e-01 | 77.0% | 100.0% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.68 | 27.0 | 4.37e-01 | 95.7% | 100.0% |
| 1o51A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 28.0 | 4.40e-01 | 71.9% | 98.9% |
| 2n8lA00 | 3.30.310.210 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.64 | 45.0 | 4.98e-01 | 97.9% | 87.4% |
| 2nyhA00 | 3.30.70.1240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › DOPA-like domains | 0.64 | 30.0 | 4.14e-01 | 77.4% | 87.9% |
| 4lbhA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.63 | 27.0 | 4.24e-01 | 71.9% | 100.0% |
| 3luyA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 26.0 | 4.05e-01 | 71.9% | 97.8% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 27.0 | 4.20e-01 | 71.9% | 99.0% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 27.0 | 4.01e-01 | 71.9% | 96.8% |
| 3kkfA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 28.0 | 4.14e-01 | 72.3% | 96.2% |
| 1x7vA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 27.0 | 4.11e-01 | 70.6% | 100.0% |
| 2qycA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 27.0 | 4.05e-01 | 72.3% | 99.0% |
| 1b64A00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.59 | 25.0 | 3.93e-01 | 72.3% | 100.0% |
| 2hfvA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.59 | 22.0 | 3.72e-01 | 71.9% | 100.0% |
| 2mdaA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 26.0 | 3.78e-01 | 83.8% | 94.7% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 26.0 | 3.95e-01 | 72.3% | 100.0% |
| 3lo3A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 25.0 | 3.87e-01 | 82.1% | 98.9% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.58 | 28.0 | 4.05e-01 | 97.0% | 97.3% |
| 4g6vB00 | 3.30.70.2920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 27.0 | 3.98e-01 | 75.3% | 100.0% |
| 3cx5B02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.57 | 29.0 | 3.74e-01 | 80.0% | 83.0% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 24.0 | 3.77e-01 | 71.9% | 98.9% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.56 | 24.0 | 3.56e-01 | 73.6% | 93.8% |
| 5xamA02 | 3.30.70.3220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 37.0 | 4.30e-01 | 80.4% | 95.7% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.55 | 35.0 | 4.07e-01 | 82.6% | 88.0% |
| 2omdA00 | 3.90.1170.40 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit | 0.54 | 29.0 | 3.64e-01 | 94.5% | 85.2% |
| 2q5wE00 | 3.90.1170.40 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit | 0.52 | 29.0 | 3.70e-01 | 95.3% | 90.5% |
| 3aawA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.52 | 34.0 | 3.93e-01 | 98.3% | 91.5% |
| 3ns6A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 24.0 | 3.38e-01 | 70.2% | 97.0% |
| 5t0oA02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.51 | 22.0 | 3.20e-01 | 79.1% | 88.3% |
| 4er8A00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.51 | 28.0 | 3.33e-01 | 94.0% | 75.8% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3167609 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.70 | 26.0 | 4.47e-01 | 71.5% | 100.0% |
| 3225950 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.68 | 27.0 | 3.70e-01 | 70.6% | 69.2% |
| 3569962 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.68 | 28.0 | 4.37e-01 | 73.2% | 93.7% |
| 4151399 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.68 | 25.0 | 4.36e-01 | 78.7% | 100.0% |
| 4515208 | 304.24.1.7 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › V_ATPase_I | 0.68 | 27.0 | 3.90e-01 | 71.5% | 75.7% |
| 3579336 | 304.5.1.23 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › V_ATPase_I | 0.67 | 27.0 | 3.93e-01 | 71.9% | 79.1% |
| 4936933 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.67 | 27.0 | 4.32e-01 | 70.6% | 100.0% |
| 5004030 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 28.0 | 4.21e-01 | 71.5% | 92.6% |
| 4976516 | 304.19.1.0 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain | 0.66 | 27.0 | 4.41e-01 | 81.7% | 100.0% |
| 4945381 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.65 | 26.0 | 4.22e-01 | 72.3% | 100.0% |
| 4326469 | 304.44.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › PriA_C | 0.64 | 25.0 | 4.12e-01 | 71.5% | 100.0% |
| 5378 | 304.53.1.1 ↗ | a+b two layers › Alpha-beta plaits › DOPA dioxygenase-like › DOPA dioxygenase-like › DOPA_dioxygen | 0.64 | 30.0 | 4.15e-01 | 77.9% | 88.7% |
| 3632109 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 28.0 | 3.97e-01 | 71.1% | 86.4% |
| 3583468 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.63 | 28.0 | 4.01e-01 | 71.5% | 88.2% |
| 3214238 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.62 | 27.0 | 3.86e-01 | 72.3% | 86.7% |
| 3500395 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.62 | 50.0 | 5.44e-01 | 99.6% | 100.0% |
| 5038160 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.62 | 26.0 | 3.86e-01 | 71.9% | 89.0% |
| 148700 | 304.12.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C | 0.62 | 27.0 | 4.01e-01 | 71.9% | 96.8% |
| 4957224 | 304.5.1.3 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CutA1 | 0.62 | 26.0 | 3.84e-01 | 71.5% | 89.0% |
| 4041354 | 304.38.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain › Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain › PyrI | 0.62 | 27.0 | 3.89e-01 | 74.9% | 91.0% |
| 3970813 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.61 | 27.0 | 4.03e-01 | 71.1% | 100.0% |
| 3250924 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 27.0 | 3.95e-01 | 78.3% | 97.0% |
| 3970630 | 304.4.1.57 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MFS_3 | 0.59 | 29.0 | 4.18e-01 | 98.7% | 99.1% |
| 3536760 | 304.7.1.20 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › MBTP1_N | 0.59 | 23.0 | 3.62e-01 | 77.0% | 96.2% |
| 4557642 | 325.1.1.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like | 0.58 | 23.0 | 3.72e-01 | 77.9% | 95.6% |
| 3308587 | 304.5.1.25 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › V-ATPase_C | 0.58 | 28.0 | 3.95e-01 | 77.9% | 95.5% |
| 3351519 | 304.126.1.2 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V-ATPase_C | 0.57 | 28.0 | 3.96e-01 | 79.6% | 97.3% |
| 4567487 | 304.44.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › PriA_C | 0.57 | 24.0 | 3.77e-01 | 70.2% | 100.0% |
| 5043596 | 304.15.1.0 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain | 0.57 | 27.0 | 3.78e-01 | 78.7% | 91.3% |
| 3597381 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.55 | 25.0 | 3.73e-01 | 70.2% | 99.0% |
| 4023966 | 304.9.1.6 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Smg4_UPF3 | 0.55 | 25.0 | 3.13e-01 | 91.9% | 67.9% |
| 5029725 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 34.0 | 4.00e-01 | 93.2% | 87.3% |
| 3740046 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 32.0 | 4.01e-01 | 86.0% | 100.0% |
| 3915011 | 389.1.1.7 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_CA | 0.53 | 28.0 | 3.30e-01 | 95.3% | 70.6% |
| 3604620 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 24.0 | 3.52e-01 | 80.9% | 99.0% |
| 3415955 | 304.126.1.2 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V-ATPase_C | 0.51 | 26.0 | 3.56e-01 | 82.1% | 97.4% |
| 3593496 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.51 | 25.0 | 3.46e-01 | 77.9% | 93.9% |