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IMGVR_UViG_3300016719_000096-3300016719-Ga0186816_1019794
Arc-VirIMGVR_UViG_3300016719_000096-3300016719-Ga0186816_1019794
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-123
Domain cluster:
rep: pig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00028__D17-130
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.84 | 64.0 | 5.36e-01 | 98.2% | 49.1% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.79 | 60.0 | 5.10e-01 | 95.4% | 51.2% |
| 1wthD01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.78 | 66.0 | 6.68e-01 | 100.0% | 91.5% |
| 2yn3B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.73 | 34.0 | 4.16e-01 | 80.7% | 67.6% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.70 | 55.0 | 5.92e-01 | 92.7% | 94.7% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.70 | 53.0 | 4.48e-01 | 93.6% | 49.4% |
| 3he1A00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.67 | 60.0 | 5.49e-01 | 100.0% | 87.1% |
| 3b4nA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 38.0 | 4.26e-01 | 100.0% | 70.5% |
| 2h41A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 37.0 | 3.99e-01 | 80.7% | 64.2% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.65 | 51.0 | 4.85e-01 | 92.7% | 72.0% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 36.0 | 4.08e-01 | 89.0% | 73.4% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 40.0 | 4.33e-01 | 89.9% | 74.7% |
| 4wiqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 38.0 | 3.86e-01 | 82.6% | 62.3% |
| 4gioA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 43.0 | 4.58e-01 | 98.2% | 85.4% |
| 1r3eA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.59 | 43.0 | 3.44e-01 | 75.2% | 57.9% |
| 1qppA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 42.0 | 4.18e-01 | 83.5% | 70.2% |
| 2oz4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 37.0 | 3.92e-01 | 85.3% | 72.2% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 40.0 | 3.86e-01 | 84.4% | 63.1% |
| 4rzkA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 42.0 | 4.68e-01 | 84.4% | 96.6% |
| 1lp9E02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 34.0 | 3.89e-01 | 83.5% | 81.2% |
| 4hd5A01 | 2.60.40.3760 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 36.0 | 3.78e-01 | 81.7% | 71.1% |
| 2w1jA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.57 | 51.0 | 4.21e-01 | 100.0% | 67.2% |
| 2ic2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 37.0 | 3.85e-01 | 83.5% | 70.2% |
| 4i3gA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 37.0 | 3.68e-01 | 77.1% | 64.0% |
| 3mdyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 37.0 | 3.74e-01 | 99.1% | 67.3% |
| 2z0uA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 42.0 | 4.00e-01 | 99.1% | 68.0% |
| 3pu2B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 41.0 | 3.62e-01 | 77.1% | 79.7% |
| 3gkeA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.55 | 39.0 | 3.18e-01 | 73.4% | 81.4% |
| 3wa5B00 | 2.60.120.1690 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 38.0 | 3.70e-01 | 78.0% | 63.7% |
| 1h4uA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.54 | 49.0 | 3.77e-01 | 99.1% | 86.5% |
| 1ix2A00 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 35.0 | 3.62e-01 | 81.7% | 69.6% |
| 3fdwA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 40.0 | 3.77e-01 | 99.1% | 65.4% |
| 2q7aA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 46.0 | 4.12e-01 | 99.1% | 67.1% |
| 6kxkB02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 42.0 | 3.95e-01 | 86.2% | 83.0% |
| 1vwxf00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.51 | 38.0 | 3.84e-01 | 81.7% | 78.0% |
| 2bn4B03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 40.0 | 3.59e-01 | 100.0% | 58.2% |
| 6fhvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.86e-01 | 97.2% | 83.7% |
| 2pndA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.74e-01 | 83.5% | 73.1% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3977382 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.85 | 71.0 | 7.56e-01 | 97.2% | 100.0% |
| 4810019 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.82 | 72.0 | 7.24e-01 | 99.1% | 91.8% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.81 | 61.0 | 6.86e-01 | 81.7% | 100.0% |
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.77 | 60.0 | 6.57e-01 | 98.2% | 98.9% |
| 3941988 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 72.0 | 7.07e-01 | 100.0% | 99.1% |
| 5002753 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 56.0 | 6.34e-01 | 93.6% | 97.6% |
| 3948350 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.76 | 65.0 | 6.79e-01 | 97.2% | 99.0% |
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.76 | 71.0 | 6.76e-01 | 100.0% | 96.8% |
| 4888819 | 1.1.13.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_1 | 0.76 | 70.0 | 7.03e-01 | 100.0% | 97.3% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.76 | 60.0 | 6.51e-01 | 98.2% | 97.8% |
| 5078836 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 62.0 | 6.20e-01 | 100.0% | 89.1% |
| 4247994 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.73 | 63.0 | 6.61e-01 | 97.2% | 100.0% |
| 5079559 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 65.0 | 6.40e-01 | 100.0% | 97.4% |
| 4057590 | 1.1.5.86 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN3 | 0.70 | 56.0 | 5.17e-01 | 100.0% | 66.4% |
| 5026275 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 42.0 | 4.58e-01 | 84.4% | 72.2% |
| 4009489 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.70 | 63.0 | 5.59e-01 | 100.0% | 85.2% |
| 2137681 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.70 | 50.0 | 5.08e-01 | 99.1% | 75.2% |
| 3511358 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 58.0 | 6.03e-01 | 94.5% | 96.0% |
| 3942090 | 1.1.5.77 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube | 0.66 | 59.0 | 5.20e-01 | 100.0% | 78.2% |
| 4444321 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.66 | 49.0 | 3.92e-01 | 92.7% | 39.5% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 55.0 | 5.29e-01 | 91.7% | 77.6% |
| 3619674 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 35.0 | 3.78e-01 | 82.6% | 60.0% |
| 4960006 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.65 | 53.0 | 5.40e-01 | 99.1% | 87.2% |
| 5054988 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 40.0 | 4.17e-01 | 83.5% | 66.0% |
| 4538400 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.65 | 52.0 | 4.90e-01 | 100.0% | 71.5% |
| 4797408 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 43.0 | 4.32e-01 | 90.8% | 66.4% |
| 5031118 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 37.0 | 3.73e-01 | 83.5% | 57.3% |
| 3970830 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 48.0 | 5.05e-01 | 94.5% | 87.0% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.63 | 55.0 | 5.49e-01 | 93.6% | 98.2% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.63 | 55.0 | 5.62e-01 | 93.6% | 98.1% |
| 3192615 | 868.1.1.8 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › SLS1_C | 0.61 | 43.0 | 3.09e-01 | 72.5% | 64.8% |
| 5067380 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.61 | 54.0 | 5.01e-01 | 98.2% | 95.0% |
| 3754223 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.61 | 44.0 | 3.39e-01 | 75.2% | 51.0% |
| 4933784 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.59 | 42.0 | 3.40e-01 | 74.3% | 61.0% |
| 5058386 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.59 | 42.0 | 3.49e-01 | 73.4% | 49.5% |
| 3692874 | 11.1.1.866 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Rha78A_N | 0.58 | 41.0 | 3.97e-01 | 85.3% | 64.0% |
| 5050023 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 45.0 | 4.05e-01 | 84.4% | 75.6% |
| 4557453 | 304.102.1.9 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N, DKCLD, TruB_C_2, Pus10_C | 0.58 | 41.0 | 3.19e-01 | 74.3% | 38.0% |
| 3981007 | 319.3.1.0 ↗ | beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ | 0.57 | 42.0 | 4.35e-01 | 78.0% | 98.1% |
| 5049530 | 319.1.1.23 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29697 | 0.57 | 41.0 | 4.51e-01 | 84.4% | 91.1% |
| 5036917 | 304.102.1.13 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_C_2 | 0.57 | 40.0 | 3.65e-01 | 74.3% | 61.3% |
| 4077036 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.56 | 40.0 | 3.19e-01 | 73.4% | 40.9% |
| 4069712 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.54 | 38.0 | 3.13e-01 | 91.7% | 39.0% |
| 3784499 | 331.3.1.6 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI | 0.54 | 34.0 | 2.83e-01 | 95.4% | 36.2% |
| 3303486 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.54 | 40.0 | 4.01e-01 | 85.3% | 77.3% |
| 3742788 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.53 | 39.0 | 3.98e-01 | 85.3% | 80.0% |
| 3565431 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 38.0 | 3.24e-01 | 100.0% | 45.6% |
| 3756664 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.53 | 38.0 | 3.30e-01 | 100.0% | 47.4% |
| 3854262 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.52 | 38.0 | 3.23e-01 | 100.0% | 44.9% |
| 3423873 | 11.1.1.214 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Pur_ac_phosph_N | 0.52 | 39.0 | 3.84e-01 | 82.6% | 71.7% |
| 3596051 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.52 | 38.0 | 3.85e-01 | 99.1% | 80.0% |
| 4513450 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.51 | 37.0 | 3.82e-01 | 80.7% | 79.0% |
| 3056605 | 11.1.1.170 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_66 | 0.50 | 29.0 | 3.06e-01 | 96.3% | 61.1% |