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IMGVR_UViG_3300017469_000184-3300017469-Ga0187308_1342610

Arc-Vir

IMGVR_UViG_3300017469_000184-3300017469-Ga0187308_1342610

Identity

Accession:: IMGVR_UViG_3300017469_000184-3300017469-Ga0187308_1342610 ↗
Kingdom:: archaea

Quality

48.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 217-335

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4w8kA02	1.20.120.920	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain	0.69	49.0	4.14e-01	73.1%	57.6%
2pv4A00	1.10.3440.10	Mainly Alpha › Orthogonal Bundle › Sama2622-like fold › Sama2622-like	0.61	51.0	4.85e-01	92.4%	91.0%
1cpcA00	1.10.490.20	Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins	0.57	34.0	3.13e-01	98.3%	43.2%
3lynB00	1.20.150.10	Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein	0.56	40.0	4.00e-01	74.8%	76.6%
2fsfB04	1.10.3060.10	Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA	0.55	39.0	3.29e-01	73.9%	80.7%
3vbbE01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.53	27.0	2.78e-01	81.5%	47.9%
4bemJ00	1.20.120.610	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase	0.53	39.0	3.41e-01	75.6%	66.3%
4m70I00	1.20.5.4130	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.50	38.0	4.00e-01	79.8%	93.5%

ECOD (16)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3989110	1075.5.1.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE	0.62	48.0	4.03e-01	81.5%	92.7%
3620375	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.59	29.0	2.65e-01	84.9%	35.5%
3770290	4177.1.1.41 ↗	alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › EVC2_like	0.58	40.0	3.47e-01	70.6%	68.2%
3641113	5073.1.1.0 ↗	alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M	0.58	51.0	3.27e-01	98.3%	80.5%
4590703	5050.1.1.54 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Mntp	0.57	46.0	4.02e-01	89.1%	92.3%
3741348	103.1.1.3 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N	0.56	42.0	3.83e-01	79.0%	60.4%
4952396	1075.5.1.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE	0.55	42.0	3.46e-01	82.4%	82.6%
5078568	5059.1.1.1 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA	0.52	38.0	2.99e-01	78.2%	55.0%
4970934	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.52	43.0	3.63e-01	89.9%	81.0%
3988537	1076.1.1.1 ↗	alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like	0.52	38.0	3.26e-01	77.3%	77.0%
3943772	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.51	26.0	2.27e-01	84.0%	31.1%
3223355	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.51	43.0	3.62e-01	92.4%	84.4%
3946208	5050.1.1.10 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2	0.51	42.0	3.43e-01	90.8%	79.1%
5050002	5050.1.1.10 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2	0.51	40.0	3.22e-01	86.6%	75.9%
3248315	7579.1.1.6 ↗	a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1	0.50	43.0	3.18e-01	95.0%	96.7%
3662074	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.50	42.0	3.48e-01	91.6%	73.2%

D2 high residues 407-533

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3k7dA01	1.20.120.1510	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.69	56.0	5.94e-01	85.0%	95.6%
2bl2A00	1.20.120.610	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase	0.65	45.0	4.25e-01	70.9%	76.9%
1r0dA00	1.20.1410.10	Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain	0.64	44.0	3.80e-01	70.1%	77.7%
4axzA00	1.10.3160.10	Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1	0.62	55.0	4.67e-01	100.0%	78.0%
3n3dB00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.56	45.0	3.42e-01	85.8%	57.5%
4zudA01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.56	42.0	3.43e-01	79.5%	66.8%
6gpxB00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.56	41.0	3.36e-01	79.5%	66.9%
3pltA00	1.20.1270.60	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain	0.55	38.0	3.26e-01	71.7%	88.8%
2igsA00	1.10.3690.10	Mainly Alpha › Orthogonal Bundle › PA2222-like fold › PA2222-like domain	0.54	43.0	3.74e-01	89.8%	96.7%
7jv7B01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.54	40.0	3.84e-01	77.2%	82.2%
1wn0A00	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.52	32.0	3.26e-01	96.1%	60.3%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3190481	3352.1.1.6 ↗	alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Glyco_transf_22	0.68	51.0	3.56e-01	78.7%	92.7%
3641396	109.3.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat	0.65	57.0	5.14e-01	97.6%	93.1%
3442684	611.9.1.4 ↗	alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N	0.62	44.0	4.39e-01	71.7%	93.1%
3195640	601.1.2.76 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › ATP-synt_C	0.62	44.0	4.17e-01	73.2%	95.5%
4020382	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.58	46.0	3.63e-01	85.0%	55.0%
3588608	3227.1.1.1 ↗	alpha complex topology › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › PTS_EIIC	0.56	43.0	3.10e-01	81.1%	33.3%
3581236	160.1.1.0 ↗	alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase	0.56	48.0	4.25e-01	94.5%	81.6%
3882204	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.55	43.0	3.24e-01	83.5%	54.5%
3968913	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.54	43.0	3.63e-01	94.5%	51.4%
4987815	1075.5.1.4 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt	0.54	44.0	3.75e-01	89.0%	72.9%
3588630	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.52	43.0	3.65e-01	87.4%	71.2%
4038724	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.52	33.0	2.78e-01	81.9%	36.4%

D3 medium residues 3-109

PDB

D4 medium residues 114-182

PDB

D5 medium residues 707-779

PDB