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IMGVR_UViG_3300017482_000059-3300017482-Ga0186907_1311922
Arc-VirIMGVR_UViG_3300017482_000059-3300017482-Ga0186907_1311922
Identity
- Kingdom:
- archaea
Quality
85.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-78
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1oaiA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.73 | 40.0 | 4.41e-01 | 71.8% | 66.1% |
| 4gewA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.71 | 39.0 | 3.80e-01 | 73.2% | 49.4% |
| 2dzlA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.70 | 41.0 | 4.24e-01 | 74.6% | 62.1% |
| 1ic8A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 56.0 | 5.19e-01 | 90.1% | 79.8% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 33.0 | 3.80e-01 | 88.7% | 61.1% |
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 43.0 | 5.04e-01 | 78.9% | 100.0% |
| 1zv1A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.64 | 37.0 | 4.08e-01 | 70.4% | 69.5% |
| 3b7hA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.64 | 48.0 | 4.78e-01 | 84.5% | 89.5% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 43.0 | 4.77e-01 | 83.1% | 90.9% |
| 1yz6A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.64 | 51.0 | 4.79e-01 | 87.3% | 86.2% |
| 1v66A00 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.63 | 48.0 | 4.96e-01 | 100.0% | 89.2% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 49.0 | 4.90e-01 | 83.1% | 85.9% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 45.0 | 4.86e-01 | 81.7% | 93.1% |
| 3safA02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.62 | 44.0 | 3.89e-01 | 73.2% | 64.0% |
| 5ekdA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.62 | 53.0 | 4.59e-01 | 94.4% | 63.1% |
| 3w0lD01 | 1.10.8.1080 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.62 | 47.0 | 4.19e-01 | 81.7% | 70.3% |
| 3wvoC02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.60 | 46.0 | 3.92e-01 | 87.3% | 90.8% |
| 1y9qA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 46.0 | 4.44e-01 | 87.3% | 85.9% |
| 7xb6B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 45.0 | 3.38e-01 | 83.1% | 63.8% |
| 1zylA03 | 1.20.1270.170 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 43.0 | 3.82e-01 | 78.9% | 80.6% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.57 | 42.0 | 4.37e-01 | 84.5% | 95.5% |
| 3godB02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.56 | 44.0 | 3.24e-01 | 87.3% | 80.8% |
| 5t3wA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.56 | 47.0 | 3.92e-01 | 100.0% | 58.4% |
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 46.0 | 3.92e-01 | 100.0% | 75.8% |
| 3k3uA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 48.0 | 3.92e-01 | 100.0% | 82.5% |
| 2rrdA00 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.55 | 42.0 | 3.80e-01 | 84.5% | 70.3% |
| 2dgzA01 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.53 | 43.0 | 3.99e-01 | 87.3% | 79.8% |
| 2vf8B02 | 1.20.1580.10 | Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain | 0.53 | 39.0 | 3.15e-01 | 83.1% | 83.6% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.52 | 38.0 | 3.35e-01 | 77.5% | 80.2% |
| 5kbwB00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.52 | 38.0 | 2.96e-01 | 78.9% | 69.6% |
| 1cnt200 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.50 | 40.0 | 3.33e-01 | 88.7% | 90.8% |
| 8gtyA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.50 | 40.0 | 3.05e-01 | 88.7% | 67.1% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3595001 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.70 | 39.0 | 4.69e-01 | 71.8% | 86.7% |
| 3794285 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.68 | 52.0 | 5.19e-01 | 100.0% | 78.7% |
| 3608559 | 3721.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 | 0.65 | 52.0 | 5.24e-01 | 87.3% | 90.0% |
| 3197246 | 3721.1.1.0 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain | 0.65 | 51.0 | 5.18e-01 | 85.9% | 88.6% |
| 3897178 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.64 | 54.0 | 5.28e-01 | 100.0% | 91.3% |
| 166410 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.64 | 48.0 | 4.78e-01 | 84.5% | 89.5% |
| 5029208 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.64 | 52.0 | 4.89e-01 | 87.3% | 88.2% |
| 4534032 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.64 | 45.0 | 4.81e-01 | 83.1% | 88.3% |
| 3873232 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.63 | 55.0 | 5.32e-01 | 100.0% | 88.7% |
| 4976690 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 40.0 | 4.66e-01 | 71.8% | 94.0% |
| 1772495 | 10.12.1.118 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30252 | 0.62 | 46.0 | 3.28e-01 | 85.9% | 25.9% |
| 3168854 | 4970.1.1.13 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › zf-C4pol | 0.57 | 34.0 | 2.94e-01 | 85.9% | 37.6% |
| 4969545 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 48.0 | 3.40e-01 | 100.0% | 35.6% |
| 4100870 | 589.1.2.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C | 0.57 | 46.0 | 3.38e-01 | 100.0% | 31.5% |
| 1888148 | 3432.1.1.1 ↗ | alpha bundles › Minor nucleoprotein VP30 C-terminal domain › Minor nucleoprotein VP30 C-terminal domain › Minor nucleoprotein VP30 C-terminal domain › Transcript_VP30 | 0.56 | 47.0 | 3.91e-01 | 100.0% | 57.6% |
| 5054079 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.55 | 37.0 | 3.63e-01 | 70.4% | 86.3% |
| 3164403 | 589.1.1.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › SurA_N | 0.53 | 42.0 | 3.16e-01 | 94.4% | 34.3% |
| 3241997 | 197.1.1.8 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › PF26570 | 0.53 | 43.0 | 4.18e-01 | 94.4% | 88.7% |
| 4026971 | 4323.1.1.2 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V-ATPase_C | 0.52 | 38.0 | 3.09e-01 | 78.9% | 53.3% |
| 3278074 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.52 | 38.0 | 2.65e-01 | 81.7% | 88.0% |
D2
high
residues 84-147
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.78 | 69.0 | 5.94e-01 | 100.0% | 91.2% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 64.0 | 5.61e-01 | 100.0% | 95.0% |
| 3oxfA05 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.73 | 62.0 | 5.95e-01 | 100.0% | 82.7% |
| 2vkjA00 | 1.20.58.2030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 59.0 | 4.99e-01 | 100.0% | 54.7% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 59.0 | 6.00e-01 | 95.3% | 100.0% |
| 6idxA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.71 | 62.0 | 4.30e-01 | 100.0% | 30.1% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 62.0 | 6.01e-01 | 100.0% | 97.3% |
| 3nowA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.70 | 60.0 | 3.76e-01 | 96.9% | 19.0% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.69 | 60.0 | 5.69e-01 | 100.0% | 94.8% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 56.0 | 4.32e-01 | 100.0% | 44.3% |
| 1zbpA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 50.0 | 4.64e-01 | 100.0% | 63.5% |
| 5l0wB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 51.0 | 4.05e-01 | 100.0% | 40.6% |
| 3kkbA00 | 1.20.120.880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain | 0.65 | 57.0 | 4.58e-01 | 100.0% | 59.5% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.64 | 56.0 | 4.63e-01 | 98.4% | 57.8% |
| 3c2gA02 | 1.10.10.1630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sys-1 C-terminal domain-like | 0.64 | 53.0 | 5.27e-01 | 98.4% | 88.2% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 53.0 | 4.27e-01 | 100.0% | 50.0% |
| 3u3iA02 | 1.20.58.1110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 51.0 | 4.38e-01 | 90.6% | 75.9% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 50.0 | 4.33e-01 | 96.9% | 53.2% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 53.0 | 4.26e-01 | 100.0% | 57.7% |
| 2yb5F01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.63 | 49.0 | 4.49e-01 | 84.4% | 65.1% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.63 | 53.0 | 4.63e-01 | 100.0% | 70.8% |
| 1zymA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.62 | 46.0 | 3.68e-01 | 78.1% | 52.4% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.62 | 51.0 | 4.01e-01 | 100.0% | 69.5% |
| 2qupA00 | 1.20.120.490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain | 0.62 | 54.0 | 4.46e-01 | 100.0% | 67.2% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 45.0 | 4.32e-01 | 81.2% | 77.9% |
| 5figA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 50.0 | 4.53e-01 | 100.0% | 73.0% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.61 | 51.0 | 4.53e-01 | 98.4% | 82.8% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 46.0 | 4.58e-01 | 81.2% | 97.0% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.61 | 49.0 | 4.38e-01 | 93.8% | 72.2% |
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.60 | 51.0 | 4.65e-01 | 100.0% | 87.9% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.60 | 53.0 | 4.29e-01 | 100.0% | 64.8% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 47.0 | 3.71e-01 | 90.6% | 54.4% |
| 3pubA01 | 1.10.10.2400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain | 0.60 | 48.0 | 4.61e-01 | 92.2% | 78.4% |
| 4gytA00 | 1.20.120.740 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YgfB uncharacterised protein family PF03695 | 0.60 | 48.0 | 3.50e-01 | 87.5% | 33.3% |
| 2jbwA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.59 | 49.0 | 4.36e-01 | 100.0% | 96.1% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.59 | 46.0 | 4.45e-01 | 93.8% | 96.2% |
| 2wy4A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 49.0 | 3.91e-01 | 98.4% | 85.6% |
| 3rkvA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 48.0 | 3.85e-01 | 100.0% | 60.5% |
| 1d2mA03 | 6.10.140.240 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 40.0 | 4.02e-01 | 73.4% | 77.3% |
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.57 | 49.0 | 4.49e-01 | 100.0% | 81.4% |
| 1cqxA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 49.0 | 3.77e-01 | 98.4% | 80.7% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 44.0 | 4.55e-01 | 87.5% | 91.9% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3693258 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.77 | 65.0 | 5.42e-01 | 93.8% | 98.2% |
| 5066847 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.77 | 65.0 | 5.88e-01 | 96.9% | 92.2% |
| 4001608 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.76 | 65.0 | 3.81e-01 | 100.0% | 11.6% |
| 3519581 | 604.12.1.4 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT1 | 0.73 | 63.0 | 5.02e-01 | 98.4% | 80.7% |
| 3514683 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.73 | 63.0 | 5.32e-01 | 100.0% | 91.8% |
| 3447097 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.73 | 64.0 | 5.39e-01 | 100.0% | 98.2% |
| 3265198 | 109.4.1.496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 | 0.72 | 62.0 | 3.60e-01 | 100.0% | 10.7% |
| 3939733 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 61.0 | 3.61e-01 | 98.4% | 11.6% |
| 4029176 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.72 | 51.0 | 4.24e-01 | 75.0% | 93.6% |
| 4028584 | 109.54.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | 0.72 | 59.0 | 4.88e-01 | 95.3% | 50.0% |
| 3216960 | 109.4.1.496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 | 0.71 | 60.0 | 3.52e-01 | 98.4% | 11.3% |
| 1806460 | 604.1.1.8 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SbsC_spectrin-like | 0.71 | 59.0 | 5.99e-01 | 96.9% | 100.0% |
| 3407107 | 109.4.1.496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 | 0.71 | 58.0 | 5.00e-01 | 96.9% | 57.1% |
| 3801787 | 604.5.1.39 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PF26581 | 0.71 | 60.0 | 4.84e-01 | 100.0% | 88.9% |
| 3765900 | 109.4.1.470 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS2 | 0.70 | 61.0 | 4.96e-01 | 100.0% | 53.6% |
| 3906597 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 62.0 | 4.01e-01 | 100.0% | 21.7% |
| 55069 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.70 | 60.0 | 5.12e-01 | 98.4% | 86.2% |
| 3267859 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.70 | 61.0 | 5.51e-01 | 100.0% | 75.6% |
| 5065593 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.68 | 57.0 | 3.86e-01 | 100.0% | 23.8% |
| 3773235 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.68 | 58.0 | 5.26e-01 | 100.0% | 80.0% |
| 3686751 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.68 | 56.0 | 5.25e-01 | 93.8% | 85.0% |
| 5027724 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.68 | 58.0 | 4.36e-01 | 100.0% | 52.9% |
| 3456188 | 109.7.1.10 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › WAV3_C | 0.68 | 59.0 | 5.63e-01 | 100.0% | 88.0% |
| 3484193 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 58.0 | 3.31e-01 | 98.4% | 9.3% |
| 3924801 | 109.4.1.1643 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RSLD_CPSF6 | 0.68 | 57.0 | 5.16e-01 | 100.0% | 74.7% |
| 3537539 | 109.4.1.496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 | 0.68 | 57.0 | 3.32e-01 | 98.4% | 10.4% |
| 3619280 | 109.4.1.496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 | 0.68 | 57.0 | 3.34e-01 | 98.4% | 10.5% |
| 3788338 | 604.12.1.9 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 | 0.68 | 59.0 | 5.69e-01 | 100.0% | 98.6% |
| 3889971 | 109.4.1.1643 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RSLD_CPSF6 | 0.67 | 57.0 | 4.88e-01 | 100.0% | 64.5% |
| 5070891 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.67 | 54.0 | 5.06e-01 | 90.6% | 80.0% |
| 3739307 | 604.12.1.56 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ASTER | 0.67 | 56.0 | 5.49e-01 | 98.4% | 95.7% |
| 4031434 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.67 | 58.0 | 5.35e-01 | 100.0% | 89.4% |
| 3890243 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.66 | 56.0 | 4.55e-01 | 96.9% | 76.9% |
| 4933335 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.66 | 56.0 | 5.30e-01 | 98.4% | 87.5% |
| 5072122 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.66 | 58.0 | 3.62e-01 | 100.0% | 18.9% |
| 3260766 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 55.0 | 4.28e-01 | 92.2% | 44.3% |
| 3773353 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.66 | 54.0 | 4.08e-01 | 96.9% | 35.3% |
| 3708191 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.66 | 56.0 | 5.35e-01 | 96.9% | 90.7% |
| 3657912 | 109.4.1.1129 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TRAPPC9-Trs120 | 0.66 | 55.0 | 3.81e-01 | 96.9% | 27.4% |
| 5076876 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.66 | 53.0 | 5.00e-01 | 92.2% | 83.7% |
| 4947260 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.65 | 54.0 | 5.12e-01 | 96.9% | 87.5% |
| 4978312 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.65 | 54.0 | 5.26e-01 | 93.8% | 97.1% |
| 3773905 | 604.3.1.33 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › RSLD_CPSF6 | 0.65 | 55.0 | 5.31e-01 | 100.0% | 94.7% |
| 3574981 | 604.12.1.91 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › RSLD_CPSF6 | 0.65 | 54.0 | 5.33e-01 | 100.0% | 98.6% |
| 3476130 | 603.1.1.3 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE | 0.65 | 53.0 | 4.33e-01 | 100.0% | 62.9% |
| 3589921 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 55.0 | 4.27e-01 | 100.0% | 50.0% |
| 3480252 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.63 | 53.0 | 5.12e-01 | 100.0% | 100.0% |
| 4988832 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.63 | 52.0 | 5.20e-01 | 96.9% | 98.5% |
| 3998776 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.62 | 50.0 | 4.77e-01 | 95.3% | 78.8% |
| 4972182 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.62 | 52.0 | 5.13e-01 | 98.4% | 100.0% |
| 5048081 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.61 | 51.0 | 4.92e-01 | 100.0% | 94.7% |
| 3475698 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 48.0 | 3.77e-01 | 92.2% | 92.0% |
| 4977808 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.60 | 50.0 | 4.92e-01 | 96.9% | 100.0% |
| 3658802 | 109.46.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › TPR1-like_2nd | 0.59 | 49.0 | 4.34e-01 | 93.8% | 63.2% |
| 4015907 | 601.33.1.14 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › Erg28 | 0.57 | 49.0 | 4.58e-01 | 100.0% | 91.7% |
| 4563321 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.57 | 50.0 | 4.59e-01 | 100.0% | 76.2% |
| 3394510 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.52 | 46.0 | 4.27e-01 | 98.4% | 90.0% |