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IMGVR_UViG_3300017482_000059-3300017482-Ga0186907_1311930

Arc-Vir

IMGVR_UViG_3300017482_000059-3300017482-Ga0186907_1311930

Identity

Kingdom:
archaea

Quality

88.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-108
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pm9A03 3.30.70.2190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 34.0 3.34e-01 89.7% 58.7%
3kq5A01 1.10.3210.40 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › 0.51 42.0 3.37e-01 89.7% 84.2%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4033923 821.1.1.0 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.79 61.0 6.12e-01 80.4% 100.0%
3666940 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.74 62.0 5.92e-01 88.8% 90.0%
3365225 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.73 60.0 5.81e-01 87.9% 85.8%
4929079 821.1.1.15 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF7508 0.72 58.0 6.16e-01 85.0% 100.0%
5018031 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.57 31.0 3.16e-01 89.7% 50.9%
4441337 206.1.3.19 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C 0.53 46.0 3.76e-01 98.1% 74.3%
3738485 219.1.1.19 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C54 0.51 38.0 2.88e-01 80.4% 39.3%