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IMGVR_UViG_3300017482_000059-3300017482-Ga0186907_1311941

Arc-Vir

IMGVR_UViG_3300017482_000059-3300017482-Ga0186907_1311941

Quality

96.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-155
PDB
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF25109.2 best HAD_PNKP 44.6 2.20e-11 98.0% 86.0%
PF03767.21 Acid_phosphat_B 29.1 9.50e-07 97.4% 50.9%
PF10307.16 HAD_SAK_1 29.4 9.00e-07 89.4% 47.3%
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4xrpA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.91 75.0 8.14e-01 98.0% 100.0%
1ltqA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.85 76.0 7.82e-01 100.0% 97.2%
4fypB00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.84 77.0 6.61e-01 100.0% 65.6%
3kzxA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.75 59.0 6.20e-01 100.0% 89.9%
3slrA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.74 66.0 6.46e-01 100.0% 88.7%
1cqzB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.73 59.0 6.26e-01 100.0% 94.1%
2hszA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 62.0 6.23e-01 100.0% 89.3%
4uw9A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 58.0 5.97e-01 100.0% 87.5%
2obbA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.72 48.0 5.36e-01 100.0% 84.3%
2dstA00 3.40.50.12270 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.71 42.0 4.58e-01 100.0% 71.3%
1u7pD00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.70 63.0 6.21e-01 100.0% 89.4%
3kbbA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.69 57.0 5.91e-01 100.0% 91.0%
6f2xA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.68 58.0 5.84e-01 100.0% 89.4%
6xl1A01 3.40.50.10770 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) 0.67 54.0 5.35e-01 100.0% 81.9%
2qjoA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.67 54.0 4.90e-01 100.0% 65.3%
2qipA00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.66 55.0 5.36e-01 100.0% 81.4%
2qjtB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.66 54.0 4.92e-01 100.0% 66.3%
1xmxA01 3.40.50.10770 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) 0.66 51.0 5.27e-01 100.0% 86.6%
4obvA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.65 45.0 3.89e-01 71.5% 68.5%
1rqlA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.64 60.0 5.66e-01 100.0% 91.6%
2qmaA03 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.64 44.0 3.77e-01 71.5% 69.6%
3zxsA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 50.0 4.97e-01 100.0% 78.8%
1dbqA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 41.0 4.34e-01 100.0% 73.1%
8a57D01 3.40.50.11060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTPase HflX, N-terminal domain 0.62 39.0 4.69e-01 100.0% 94.1%
3qkwB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.62 41.0 3.90e-01 100.0% 57.5%
1lw7A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 52.0 4.99e-01 100.0% 80.5%
3wg9A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 43.0 4.46e-01 100.0% 78.6%
4hwgA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.59 51.0 4.58e-01 100.0% 65.9%
4nesA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.59 52.0 4.77e-01 100.0% 72.7%
3qyfA01 3.40.50.10770 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) 0.59 52.0 5.07e-01 100.0% 87.9%
1o6cB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 53.0 4.65e-01 100.0% 67.7%
1f3lA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 44.0 4.58e-01 80.1% 100.0%
1fs0G01 3.40.1380.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit 0.58 44.0 4.66e-01 96.7% 91.5%
4koaA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 44.0 4.86e-01 100.0% 98.4%
1gvhA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.57 47.0 4.89e-01 100.0% 93.7%
5bmoC00 3.40.50.10320 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like 0.57 52.0 4.41e-01 100.0% 67.4%
3cggA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 45.0 4.21e-01 84.8% 90.3%
4lgvA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 52.0 4.78e-01 100.0% 85.2%
2au3A03 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.54 37.0 4.03e-01 78.8% 84.7%
4xfkA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 44.0 4.20e-01 95.4% 75.0%
4gx0B04 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 39.0 4.16e-01 100.0% 88.5%
8inpA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 48.0 4.14e-01 100.0% 78.8%
6xehA01 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 35.0 3.96e-01 100.0% 90.1%
4py5A02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 44.0 4.01e-01 100.0% 68.2%
1wywA00 3.40.470.10 Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain 0.52 40.0 3.61e-01 82.1% 79.2%
5tz8A01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.52 47.0 4.10e-01 100.0% 86.7%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4972563 2006.1.1.43 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_PNKP 0.93 90.0 8.65e-01 100.0% 99.4%
4992093 2006.1.1.43 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_PNKP 0.91 83.0 8.33e-01 98.0% 94.0%
4956037 2006.1.1.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_phosphat_B 0.89 85.0 8.38e-01 100.0% 98.8%
5001495 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.89 84.0 8.14e-01 98.7% 99.4%
5078078 2006.1.1.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_phosphat_B 0.89 85.0 7.55e-01 100.0% 89.7%
3947733 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.88 74.0 7.93e-01 98.0% 100.0%
5040082 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.87 73.0 7.69e-01 100.0% 96.3%
3274590 2006.1.1.25 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_SAK_1 0.85 81.0 7.24e-01 100.0% 90.5%
3613145 2006.1.1.25 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_SAK_1 0.84 80.0 6.29e-01 100.0% 88.4%
3594808 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.84 80.0 6.79e-01 100.0% 85.1%
3303560 2006.1.1.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_phosphat_B 0.83 77.0 6.58e-01 100.0% 64.9%
5028556 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.83 78.0 6.63e-01 100.0% 95.3%
3359389 2006.1.1.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_phosphat_B 0.82 76.0 6.49e-01 100.0% 65.3%
5035723 2006.1.1.40 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › LNS2_PITM1-3 0.80 52.0 6.06e-01 100.0% 90.9%
4941805 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.79 75.0 6.54e-01 100.0% 94.0%
5001400 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.79 74.0 6.16e-01 100.0% 95.2%
4459850 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.79 74.0 6.11e-01 99.3% 96.0%
3775314 2006.1.1.40 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › LNS2_PITM1-3 0.78 69.0 6.56e-01 100.0% 81.8%
5051201 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.77 74.0 6.83e-01 100.0% 89.7%
3788157 2006.1.1.28 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › APP1_cat 0.77 74.0 5.91e-01 100.0% 83.3%
1405749 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.77 73.0 6.23e-01 100.0% 91.7%
9879 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.77 72.0 5.96e-01 100.0% 93.8%
4972063 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.77 72.0 6.21e-01 100.0% 94.2%
3307688 2006.1.1.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_phosphat_B 0.75 67.0 5.72e-01 100.0% 61.7%
3726503 2006.1.1.28 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › APP1_cat 0.74 70.0 6.12e-01 100.0% 80.9%
5014377 2006.1.1.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_PPase 0.73 65.0 6.45e-01 100.0% 91.0%
5039917 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.73 68.0 6.17e-01 100.0% 86.9%
4971662 2006.1.1.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_PPase 0.71 64.0 6.32e-01 100.0% 90.6%
5010337 2006.1.1.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_PPase 0.71 65.0 6.14e-01 100.0% 83.4%
3284777 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.70 53.0 5.80e-01 100.0% 95.2%
2717225 7592.1.1.8 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF_Card1 0.67 54.0 5.29e-01 100.0% 78.8%
4944992 7512.1.1.8 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.63 56.0 5.06e-01 100.0% 70.2%
4998265 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.62 50.0 4.84e-01 100.0% 75.3%
3962017 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.61 44.0 4.63e-01 98.0% 80.7%
5033225 7512.1.1.8 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.61 53.0 4.82e-01 100.0% 69.8%
4318623 2007.2.1.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.60 38.0 3.78e-01 80.8% 58.7%
4947674 2007.2.1.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins 0.60 45.0 4.53e-01 78.1% 99.4%
5053073 7522.1.1.0 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.60 39.0 4.49e-01 77.5% 90.7%
4958618 2007.1.5.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG 0.60 39.0 4.07e-01 100.0% 71.9%
4973516 2007.2.1.5 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_4 0.60 46.0 4.56e-01 80.8% 98.1%
3940369 2007.9.1.0 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain 0.60 39.0 3.98e-01 80.1% 66.9%
5003971 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.60 48.0 4.47e-01 100.0% 67.4%
3165669 2005.1.1.13 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.60 50.0 4.58e-01 100.0% 68.5%
4310954 7512.1.1.8 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.59 53.0 4.71e-01 100.0% 69.0%
4953370 2007.2.1.5 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_4 0.59 45.0 4.43e-01 80.1% 99.4%
4034025 7512.1.1.8 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.58 52.0 4.72e-01 100.0% 71.2%
3584468 2005.1.1.36 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.58 54.0 4.85e-01 100.0% 82.4%
3972280 2007.1.4.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain 0.57 50.0 4.79e-01 100.0% 81.7%
4658050 2007.1.4.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase 0.57 50.0 4.77e-01 100.0% 81.7%
4954808 2007.2.1.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.57 38.0 3.86e-01 100.0% 69.0%
3673071 7516.1.1.16 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_43 0.57 51.0 4.25e-01 96.0% 77.3%
3985686 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.57 44.0 4.55e-01 91.4% 87.9%
5049554 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.55 51.0 4.89e-01 100.0% 93.1%
4974796 7516.1.1.2 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.54 50.0 4.14e-01 100.0% 81.5%
5059867 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.53 48.0 4.40e-01 100.0% 77.5%
5051887 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.53 40.0 3.99e-01 100.0% 76.2%
5014953 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.52 47.0 4.59e-01 100.0% 88.2%
5029129 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.51 46.0 4.31e-01 100.0% 80.5%
5035900 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.50 39.0 3.79e-01 82.1% 98.8%