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IMGVR_UViG_3300017593_001565-3300017593-Ga0187538_12649130

Arc-Vir

IMGVR_UViG_3300017593_001565-3300017593-Ga0187538_12649130

Identity

Kingdom:
archaea

Quality

78.6 mean pLDDT

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-131
PDB
Domain cluster: rep: MW960030.1__QWY82978.1__X__00024__D5-103
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02195.27 best ParB_N 78.5 5.40e-22 71.9% 88.3%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xw3A01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.77 54.0 6.23e-01 87.5% 95.8%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 26.0 4.01e-01 86.7% 83.3%
2hwjA01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.63 50.0 5.11e-01 84.4% 85.7%
5dikA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.61 37.0 3.98e-01 96.1% 69.6%
6fhpD00 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.52 27.0 3.62e-01 79.7% 100.0%
3beyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.52 33.0 3.68e-01 85.2% 84.0%
2wvlB00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.51 45.0 3.22e-01 96.1% 53.9%
6n7pX01 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 40.0 3.10e-01 84.4% 58.9%
2qsbA00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.51 29.0 3.44e-01 81.2% 82.4%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4928673 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.93 57.0 7.33e-01 85.2% 100.0%
3945776 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.92 64.0 7.46e-01 71.1% 95.8%
5073612 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.87 64.0 7.05e-01 75.8% 94.3%
3280315 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.86 56.0 6.91e-01 70.3% 100.0%
4862436 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.84 59.0 6.80e-01 71.1% 98.9%
2543651 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.83 55.0 6.61e-01 83.6% 97.8%
4683061 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.82 58.0 6.75e-01 76.6% 97.9%
5052345 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.82 56.0 6.57e-01 73.4% 98.9%
3942571 101.1.1.198 ↗ alpha arrays › HTH › HTH › Three-helical HTH › KorB 0.82 37.0 5.17e-01 99.2% 86.2%
2061501 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.80 51.0 5.82e-01 82.8% 83.8%
5083282 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.80 56.0 6.27e-01 71.9% 97.0%
4931651 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.78 50.0 5.78e-01 85.2% 87.4%
4974679 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.78 49.0 5.47e-01 84.4% 78.8%
3278076 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.78 53.0 6.20e-01 93.0% 97.8%
3772471 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.78 51.0 6.11e-01 87.5% 95.6%
3948471 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.78 56.0 5.94e-01 75.0% 88.7%
85732 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.76 53.0 5.52e-01 87.5% 76.0%
5081788 876.1.1.4 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 0.74 51.0 5.44e-01 70.3% 96.4%
3602844 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.73 50.0 5.16e-01 84.4% 74.2%
5018770 876.1.1.4 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 0.68 56.0 5.67e-01 87.5% 100.0%
3701649 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.68 47.0 5.31e-01 88.3% 92.0%
5000279 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.68 52.0 4.95e-01 95.3% 68.7%
4984325 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.66 51.0 4.73e-01 80.5% 70.6%
5057878 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.65 56.0 5.48e-01 96.1% 83.5%
5083737 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.64 50.0 4.74e-01 81.2% 97.3%
4947338 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.58 53.0 4.60e-01 96.9% 88.4%