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IMGVR_UViG_3300017593_001614-3300017593-Ga0187538_10406117
Arc-VirIMGVR_UViG_3300017593_001614-3300017593-Ga0187538_10406117
Identity
- Kingdom:
- archaea
Quality
93.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-52
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mf9A00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.64 | 54.0 | 3.89e-01 | 100.0% | 61.1% |
| 4p0dA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 49.0 | 3.72e-01 | 85.4% | 42.6% |
| 4iapA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 46.0 | 3.85e-01 | 83.3% | 80.4% |
| 3rkgA01 | 2.40.128.330 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 44.0 | 3.62e-01 | 77.1% | 81.9% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.61 | 49.0 | 4.49e-01 | 91.7% | 84.8% |
| 2r6fA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.59 | 44.0 | 3.86e-01 | 81.2% | 69.4% |
| 4nbiB00 | 3.50.80.10 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-tyrosyl-tRNA(Tyr) deacylase | 0.58 | 42.0 | 3.07e-01 | 81.2% | 87.4% |
| 3payC01 | 2.60.40.2100 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 46.0 | 3.19e-01 | 89.6% | 35.6% |
| 6fwvA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 3.67e-01 | 85.4% | 55.6% |
| 2p0hA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 40.0 | 3.20e-01 | 81.2% | 79.7% |
| 3bgaA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 3.38e-01 | 87.5% | 81.1% |
| 2j3wC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 38.0 | 2.81e-01 | 72.9% | 54.8% |
| 3hqiA01 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.56 | 45.0 | 3.44e-01 | 100.0% | 83.2% |
| 3gf8A01 | 2.60.40.2100 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 45.0 | 3.21e-01 | 89.6% | 38.6% |
| 4jklA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 3.59e-01 | 89.6% | 77.9% |
| 4dbrA02 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.54 | 49.0 | 3.04e-01 | 100.0% | 43.1% |
| 3of1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 46.0 | 3.43e-01 | 100.0% | 42.9% |
| 4g5aA00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 42.0 | 3.36e-01 | 87.5% | 67.7% |
| 4lr4A01 | 2.60.120.1420 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 44.0 | 3.01e-01 | 91.7% | 72.2% |
| 1wj3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 3.56e-01 | 95.8% | 74.2% |
| 5c71A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 3.49e-01 | 91.7% | 79.2% |
| 3fn9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 3.36e-01 | 93.8% | 80.8% |
| 4xpmB00 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.53 | 38.0 | 3.44e-01 | 77.1% | 95.5% |
| 5hccB02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.53 | 40.0 | 3.32e-01 | 87.5% | 84.2% |
| 5z06B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.62e-01 | 97.9% | 69.6% |
| 3rj2X00 | 2.60.120.1150 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 38.0 | 2.96e-01 | 85.4% | 30.8% |
| 3ms6A00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.53 | 38.0 | 3.16e-01 | 79.2% | 80.0% |
| 1fhoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 37.0 | 2.94e-01 | 79.2% | 76.5% |
| 1z9mA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.24e-01 | 89.6% | 80.8% |
| 3c12A02 | 2.60.40.4070 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 46.0 | 3.77e-01 | 100.0% | 81.6% |
| 4es8B02 | 2.60.40.3580 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 44.0 | 3.53e-01 | 100.0% | 75.2% |
| 8dkuA02 | 2.70.50.60 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › abc- transporter (atp binding component) like domain | 0.52 | 44.0 | 3.18e-01 | 97.9% | 67.3% |
| 2p9rA00 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.52 | 41.0 | 3.43e-01 | 100.0% | 76.5% |
| 3gzkA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 3.55e-01 | 89.6% | 86.1% |
| 2yocA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 44.0 | 3.45e-01 | 100.0% | 57.4% |
| 2r5oA01 | 2.70.50.60 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › abc- transporter (atp binding component) like domain | 0.51 | 42.0 | 3.11e-01 | 100.0% | 68.9% |
| 2wzpP03 | 2.60.120.880 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 3.26e-01 | 97.9% | 82.7% |
| 2x5pA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 3.44e-01 | 100.0% | 60.6% |
| 1hx6B01 | 2.70.9.30 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Viral coat protein p3 | 0.51 | 43.0 | 2.83e-01 | 100.0% | 53.6% |
| 5u3fB01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.51 | 38.0 | 2.86e-01 | 87.5% | 95.7% |
| 2j1vA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 39.0 | 3.04e-01 | 97.9% | 92.9% |
| 2xwxA03 | 2.60.40.2550 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 38.0 | 3.15e-01 | 87.5% | 77.6% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3404654 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 49.0 | 3.49e-01 | 81.2% | 67.1% |
| 4964937 | 821.1.1.15 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF7508 | 0.65 | 54.0 | 4.89e-01 | 100.0% | 72.9% |
| 3926888 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 49.0 | 3.65e-01 | 100.0% | 85.2% |
| 405111 | 11.1.4.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Mfa2 | 0.58 | 46.0 | 3.29e-01 | 89.6% | 40.0% |
| 5070409 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.57 | 48.0 | 4.07e-01 | 100.0% | 64.8% |
| 3643847 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 43.0 | 2.92e-01 | 81.2% | 36.6% |
| 3783226 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 3.64e-01 | 91.7% | 78.2% |
| 4582228 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 49.0 | 3.60e-01 | 100.0% | 82.1% |
| 1117679 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.57 | 49.0 | 3.53e-01 | 100.0% | 79.9% |
| 4009994 | 11.1.1.31 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG2 | 0.56 | 44.0 | 3.45e-01 | 89.6% | 78.2% |
| 3950412 | 11.1.4.130 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF1416 | 0.56 | 47.0 | 4.08e-01 | 95.8% | 64.0% |
| 3213855 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.56 | 46.0 | 3.79e-01 | 93.8% | 73.3% |
| 4296554 | 11.1.1.31 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG2 | 0.55 | 44.0 | 3.42e-01 | 91.7% | 76.5% |
| 4968868 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 43.0 | 3.33e-01 | 87.5% | 70.4% |
| 3220268 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 39.0 | 2.90e-01 | 79.2% | 84.7% |
| 3897565 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 43.0 | 3.68e-01 | 93.8% | 75.6% |
| 3927867 | 11.1.4.70 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO1-like_1st | 0.55 | 40.0 | 3.29e-01 | 79.2% | 57.8% |
| 4594988 | 11.1.1.608 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Por_Secre_tail | 0.55 | 41.0 | 3.64e-01 | 81.2% | 65.7% |
| 3453800 | 10.12.1.3 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 | 0.55 | 41.0 | 2.65e-01 | 91.7% | 28.8% |
| 3569689 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 45.0 | 3.72e-01 | 93.8% | 76.7% |
| 5041319 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.54 | 47.0 | 3.89e-01 | 100.0% | 71.1% |
| 5053230 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 42.0 | 3.29e-01 | 91.7% | 40.0% |
| 5037565 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 41.0 | 3.68e-01 | 85.4% | 92.9% |
| 5041016 | 10.1.2.181 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › CBM_4_9 | 0.54 | 44.0 | 3.16e-01 | 100.0% | 97.6% |
| 3531190 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 45.0 | 3.69e-01 | 93.8% | 76.7% |
| 3320938 | 4020.1.1.1 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › Aminotran_4 | 0.53 | 40.0 | 2.92e-01 | 89.6% | 82.4% |
| 3996048 | 11.1.1.161 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TPPII | 0.53 | 47.0 | 3.51e-01 | 100.0% | 78.3% |
| 4940617 | 11.1.1.184 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Wzt_C | 0.53 | 45.0 | 3.26e-01 | 97.9% | 69.7% |
| 3593703 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 3.30e-01 | 91.7% | 82.6% |
| 5022706 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 3.60e-01 | 93.8% | 77.8% |
| 3756132 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.53 | 44.0 | 3.56e-01 | 93.8% | 76.8% |
| 4062229 | 11.1.1.31 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG2 | 0.53 | 43.0 | 3.38e-01 | 91.7% | 81.0% |
| 2453076 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.52 | 42.0 | 3.31e-01 | 91.7% | 83.2% |
| 5022921 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 41.0 | 3.30e-01 | 91.7% | 72.4% |
| 3531179 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 39.0 | 3.44e-01 | 91.7% | 78.8% |
| 4972026 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 3.47e-01 | 93.8% | 80.0% |
| 5083968 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 43.0 | 3.18e-01 | 91.7% | 75.2% |
| 5033710 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 41.0 | 3.23e-01 | 89.6% | 83.8% |
| 5074633 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 40.0 | 3.17e-01 | 89.6% | 68.2% |
| 4969829 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 3.42e-01 | 93.8% | 80.0% |
| 3913084 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 41.0 | 3.42e-01 | 93.8% | 73.3% |
| 3621110 | 11.1.1.31 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG2 | 0.50 | 39.0 | 3.21e-01 | 91.7% | 83.0% |
| 4376820 | 11.1.1.1352 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG2, A2M_BRD, bMG3 | 0.50 | 39.0 | 2.27e-01 | 95.8% | 14.4% |
| 3970564 | 11.1.1.1362 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF3426 | 0.50 | 41.0 | 3.33e-01 | 93.8% | 93.0% |
| 3848604 | 11.1.1.1057 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M, MG2, A2M_BRD, MG4, MG1 | 0.50 | 39.0 | 2.26e-01 | 93.8% | 13.6% |