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IMGVR_UViG_3300017593_001614-3300017593-Ga0187538_10406130

Arc-Vir

IMGVR_UViG_3300017593_001614-3300017593-Ga0187538_10406130

Quality

92.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-82
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pkcC00 6.20.90.20 Special › Other non-globular › SH3 type barrels. › Benzylsuccinate synthase gamma subunit 0.56 26.0 3.45e-01 70.4% 85.4%
2jr1A01 3.30.160.510 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Histone-like nucleoid-structuring protein H-NS 0.54 35.0 3.80e-01 74.1% 82.8%
2qrdB01 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.53 23.0 3.06e-01 72.8% 78.4%
2qlvB02 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.52 23.0 2.99e-01 72.8% 78.9%
3o27B00 2.10.260.10 Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › 0.52 30.0 3.37e-01 79.0% 78.9%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5032176 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.52 32.0 3.55e-01 77.8% 81.7%
3451717 1.1.11.1 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.52 36.0 3.63e-01 72.8% 100.0%
4973288 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.52 30.0 3.53e-01 77.8% 85.5%
3687618 304.9.1.79 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28976 0.51 44.0 3.56e-01 100.0% 72.7%
3747930 6006.1.1.4 extended segments › Voltage gated calcium channel IQ domain › Voltage gated calcium channel IQ domain › Voltage gated calcium channel IQ domain › PF28678 0.50 31.0 3.21e-01 70.4% 62.5%