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IMGVR_UViG_3300017713_000356-3300017713-Ga0181391_10004821
Arc-VirIMGVR_UViG_3300017713_000356-3300017713-Ga0181391_10004821
Identity
- Kingdom:
- archaea
Quality
84.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 923-1031
Domain cluster:
rep: IMGVR_UViG_3300026259_000100-3300026259-Ga0208896_10049761__D108-217
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6tr4A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 46.0 | 4.37e-01 | 100.0% | 61.8% |
| 1loxA02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.64 | 47.0 | 4.69e-01 | 97.2% | 74.8% |
| 3hqxA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 33.0 | 3.44e-01 | 100.0% | 52.4% |
| 4fcaA01 | 2.60.120.1250 | Mainly Beta › Sandwich › Jelly Rolls › Peptidase M60, enhancin-like domain 1 | 0.62 | 40.0 | 4.01e-01 | 96.3% | 64.2% |
| 6oauA02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.61 | 45.0 | 4.41e-01 | 96.3% | 70.5% |
| 1kiuB01 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.60 | 46.0 | 4.05e-01 | 100.0% | 55.3% |
| 5y4mA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 46.0 | 4.11e-01 | 100.0% | 60.0% |
| 8hhvA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 43.0 | 4.17e-01 | 99.1% | 69.7% |
| 7wqxA01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.58 | 40.0 | 4.04e-01 | 100.0% | 72.6% |
| 1k3iA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 43.0 | 3.91e-01 | 100.0% | 56.5% |
| 4rft000 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 50.0 | 4.38e-01 | 100.0% | 63.8% |
| 2crmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 37.0 | 4.23e-01 | 87.2% | 91.1% |
| 2df7A02 | 2.60.120.660 | Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus | 0.56 | 51.0 | 4.72e-01 | 100.0% | 95.0% |
| 2ztnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 50.0 | 4.19e-01 | 100.0% | 64.7% |
| 2y26A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 45.0 | 4.00e-01 | 100.0% | 59.3% |
| 4nwvA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 49.0 | 4.16e-01 | 100.0% | 62.0% |
| 4qpiC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 48.0 | 3.80e-01 | 100.0% | 50.4% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 48.0 | 3.81e-01 | 100.0% | 46.0% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 42.0 | 3.90e-01 | 99.1% | 62.6% |
| 3napB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 48.0 | 3.77e-01 | 100.0% | 46.6% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 49.0 | 3.85e-01 | 100.0% | 49.6% |
| 1sppB00 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.54 | 37.0 | 3.68e-01 | 100.0% | 67.9% |
| 1wmdA02 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 44.0 | 4.32e-01 | 99.1% | 82.9% |
| 6sk6A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 47.0 | 3.60e-01 | 100.0% | 47.3% |
| 1opoC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 48.0 | 4.19e-01 | 100.0% | 66.1% |
| 1smvC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 47.0 | 3.80e-01 | 100.0% | 63.5% |
| 2g9gA00 | 2.60.120.1020 | Mainly Beta › Sandwich › Jelly Rolls › PAW domain | 0.53 | 48.0 | 4.03e-01 | 100.0% | 86.2% |
| 2eddA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 4.04e-01 | 98.2% | 78.6% |
| 5aca300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 3.72e-01 | 100.0% | 51.8% |
| 3iiiA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 47.0 | 4.00e-01 | 100.0% | 72.4% |
| 3qjoA02 | 2.60.310.10 | Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › Haemocyanin C-terminal domain | 0.52 | 42.0 | 4.24e-01 | 96.3% | 84.8% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 45.0 | 3.53e-01 | 100.0% | 44.0% |
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 3.71e-01 | 100.0% | 51.6% |
| 2ws9300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 3.67e-01 | 100.0% | 51.3% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 45.0 | 3.52e-01 | 100.0% | 45.4% |
| 1kshB00 | 2.70.50.40 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › GMP phosphodiesterase, delta subunit | 0.52 | 41.0 | 3.78e-01 | 97.2% | 64.8% |
| 1b35C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.40e-01 | 99.1% | 55.0% |
| 5u8rA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 4.43e-01 | 98.2% | 93.5% |
| 5jtwB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 4.02e-01 | 96.3% | 84.0% |
| 5mqcB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 3.62e-01 | 100.0% | 48.1% |
| 3jb8A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 3.85e-01 | 100.0% | 62.7% |
| 1tme200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 46.0 | 3.50e-01 | 100.0% | 58.0% |
| 5fjqA00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.51 | 43.0 | 3.66e-01 | 100.0% | 56.1% |
| 1ex0A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 4.31e-01 | 99.1% | 89.5% |
| 1dg6A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 45.0 | 4.11e-01 | 100.0% | 74.5% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 44.0 | 3.70e-01 | 100.0% | 56.0% |
| 2n59A00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 39.0 | 4.06e-01 | 98.2% | 91.1% |
| 2gh8A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 44.0 | 3.63e-01 | 100.0% | 53.5% |
| 3m1hD00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 38.0 | 3.32e-01 | 82.6% | 80.7% |
| 3jciA00 | 2.60.120.950 | Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein | 0.50 | 40.0 | 3.40e-01 | 88.1% | 90.5% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5005781 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.65 | 42.0 | 4.29e-01 | 99.1% | 67.6% |
| 4648192 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 42.0 | 4.15e-01 | 99.1% | 61.7% |
| 5042811 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.61 | 48.0 | 4.66e-01 | 99.1% | 76.5% |
| 5060540 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 45.0 | 4.09e-01 | 100.0% | 58.0% |
| 5039035 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 45.0 | 4.72e-01 | 99.1% | 89.8% |
| 5056603 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 45.0 | 4.13e-01 | 100.0% | 62.9% |
| 3309892 | 11.1.4.71 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO1-like_7th | 0.58 | 39.0 | 4.42e-01 | 93.6% | 93.8% |
| 5013572 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 37.0 | 3.86e-01 | 97.2% | 69.0% |
| 5042965 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 52.0 | 4.76e-01 | 99.1% | 81.4% |
| 3392961 | 10.2.1.31 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin | 0.58 | 43.0 | 4.16e-01 | 100.0% | 70.0% |
| 3561036 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.58 | 52.0 | 4.23e-01 | 100.0% | 54.4% |
| 4468775 | 10.2.1.55 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL | 0.57 | 41.0 | 4.30e-01 | 100.0% | 82.0% |
| 3606028 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 45.0 | 4.44e-01 | 100.0% | 77.1% |
| 3805853 | 10.32.1.192 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID | 0.57 | 51.0 | 4.23e-01 | 100.0% | 56.4% |
| 5043348 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 51.0 | 4.35e-01 | 100.0% | 78.8% |
| 4135250 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.55 | 50.0 | 3.50e-01 | 100.0% | 42.6% |
| 3235629 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.55 | 50.0 | 4.25e-01 | 100.0% | 97.7% |
| 4456175 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.54 | 49.0 | 3.90e-01 | 100.0% | 66.4% |
| 3973967 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 42.0 | 4.35e-01 | 100.0% | 90.0% |
| 3307805 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.54 | 43.0 | 3.71e-01 | 100.0% | 55.3% |
| 5065313 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 4.25e-01 | 97.2% | 85.5% |
| 3178419 | 11.1.1.378 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Rgp1 | 0.52 | 46.0 | 4.11e-01 | 99.1% | 83.3% |
| 5020006 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 39.0 | 4.15e-01 | 95.4% | 89.5% |
| 4981984 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 39.0 | 4.06e-01 | 97.2% | 87.0% |
| None | — | 0.51 | 47.0 | 3.49e-01 | 100.0% | 42.6% | |
| 4020668 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.51 | 43.0 | 4.22e-01 | 90.8% | 89.2% |
| 3746356 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.51 | 46.0 | 3.64e-01 | 100.0% | 50.0% |
| 4388794 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 44.0 | 4.15e-01 | 98.2% | 78.5% |
| 3235703 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 45.0 | 4.07e-01 | 97.2% | 93.3% |
| 3249431 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.51 | 39.0 | 3.70e-01 | 82.6% | 92.6% |
| 3938202 | 11.2.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL | 0.51 | 45.0 | 4.23e-01 | 96.3% | 97.7% |
| 4971125 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 3.88e-01 | 79.8% | 93.6% |
| 3824379 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 38.0 | 2.44e-01 | 78.9% | 24.7% |
| 4900996 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.51 | 44.0 | 3.74e-01 | 100.0% | 57.6% |
| 3610592 | 11.2.1.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › B9-C2 | 0.51 | 44.0 | 3.77e-01 | 98.2% | 90.8% |
| 3437928 | 11.2.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 | 0.50 | 45.0 | 4.32e-01 | 100.0% | 96.0% |
| None | — | 0.50 | 45.0 | 2.87e-01 | 100.0% | 24.5% | |
| 3934853 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 36.0 | 3.73e-01 | 96.3% | 81.0% |
D2
high
residues 1047-1189
Domain cluster:
rep: IMGVR_UViG_3300011268_000650-3300011268-Ga0151620_10046259__DFULL
D3
medium
residues 16-41_53-94_343-372
D4
medium
residues 376-523
Domain cluster:
rep: IMGVR_UViG_3300014911_000006-3300014911-Ga0180301_1000010541__D986-1140
D5
medium
residues 555-565_585-697_740-769
Domain cluster:
representative
D6
medium
residues 566-584_698-739
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 33.0 | 3.61e-01 | 86.9% | 62.0% |
| 3v98A03 | 3.10.450.60 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 48.0 | 3.97e-01 | 90.2% | 82.8% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 42.0 | 4.08e-01 | 93.4% | 65.7% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 39.0 | 3.71e-01 | 91.8% | 57.7% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 40.0 | 3.97e-01 | 93.4% | 65.7% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 38.0 | 3.74e-01 | 86.9% | 60.6% |
| 5wb2B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 38.0 | 3.64e-01 | 93.4% | 60.3% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 35.0 | 3.59e-01 | 98.4% | 68.4% |
| 1y8tA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 46.0 | 4.16e-01 | 100.0% | 69.3% |
| 1amiA04 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.54 | 45.0 | 3.16e-01 | 100.0% | 26.7% |
| 3moiA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 41.0 | 2.97e-01 | 86.9% | 98.5% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 37.0 | 3.64e-01 | 91.8% | 65.7% |
| 2mp1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 38.0 | 3.56e-01 | 95.1% | 59.7% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 40.0 | 3.28e-01 | 88.5% | 76.5% |
| 7k7jA02 | 2.60.40.1770 | Mainly Beta › Sandwich › Immunoglobulin-like › ephrin a2 ectodomain | 0.52 | 32.0 | 3.26e-01 | 78.7% | 61.3% |
| 3vgfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 3.99e-01 | 96.7% | 98.8% |
| 4iq0C02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 44.0 | 3.24e-01 | 100.0% | 79.6% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 39.0 | 3.70e-01 | 95.1% | 67.6% |
| 3kbgA02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.52 | 30.0 | 3.19e-01 | 90.2% | 62.3% |
| 4ntqA00 | 3.10.380.20 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain | 0.52 | 40.0 | 3.77e-01 | 88.5% | 69.7% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 40.0 | 3.90e-01 | 96.7% | 76.1% |
| 2cxiA02 | 3.50.40.10 | Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 | 0.51 | 39.0 | 2.88e-01 | 90.2% | 69.2% |
| 6aqgA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 37.0 | 2.93e-01 | 95.1% | 34.8% |
| 1xdiA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 44.0 | 3.03e-01 | 100.0% | 85.3% |
| 4bzyA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 3.44e-01 | 95.1% | 93.8% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4315771 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.59 | 38.0 | 3.81e-01 | 95.1% | 63.1% |
| 4629735 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 36.0 | 3.58e-01 | 91.8% | 64.6% |
| 3975209 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 44.0 | 3.98e-01 | 96.7% | 98.9% |
| 4170913 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.53 | 43.0 | 4.01e-01 | 98.4% | 71.2% |
| 4025365 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.52 | 44.0 | 3.74e-01 | 100.0% | 86.4% |
| 5082853 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.52 | 38.0 | 3.03e-01 | 80.3% | 70.8% |
| 5028066 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.51 | 36.0 | 3.58e-01 | 98.4% | 70.8% |
| 3974499 | 2487.1.1.3 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Aconitase_C | 0.50 | 40.0 | 2.80e-01 | 98.4% | 61.5% |
| 3280079 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.50 | 38.0 | 3.11e-01 | 86.9% | 95.4% |
D7
medium
residues 770-856
Domain cluster:
rep: IMGVR_UViG_3300017642_000002-3300017642-Ga0183098_1071013__D184-256
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 50.0 | 4.94e-01 | 87.4% | 90.4% |
| 3e1yE01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 55.0 | 5.55e-01 | 95.4% | 97.7% |
| 3okxB00 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.62 | 52.0 | 4.33e-01 | 92.0% | 84.6% |
| 3kmhA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 40.0 | 3.03e-01 | 98.9% | 28.0% |
| 2ozjA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 34.0 | 3.19e-01 | 96.6% | 46.8% |
| 4mv2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 34.0 | 3.12e-01 | 97.7% | 42.5% |
| 4p25D01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.57 | 48.0 | 3.76e-01 | 94.3% | 89.7% |
| 3cewA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 33.0 | 3.10e-01 | 96.6% | 46.4% |
| 3t64A01 | 2.70.40.10 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) | 0.55 | 47.0 | 4.12e-01 | 98.9% | 76.1% |
| 2vecA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 35.0 | 3.32e-01 | 100.0% | 53.4% |
| 3fjsC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 32.0 | 2.99e-01 | 98.9% | 45.8% |
| 2j7qA00 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.54 | 48.0 | 3.53e-01 | 100.0% | 60.2% |
| 1yhfA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 31.0 | 2.93e-01 | 98.9% | 44.5% |
| 2r2zA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.53 | 36.0 | 3.71e-01 | 71.3% | 78.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4934153 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.68 | 58.0 | 5.67e-01 | 95.4% | 85.3% |
| 4279392 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.59 | 34.0 | 3.31e-01 | 95.4% | 50.5% |
| 4927710 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.58 | 34.0 | 3.33e-01 | 97.7% | 51.0% |
| 2448132 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.58 | 34.0 | 3.20e-01 | 97.7% | 45.5% |
| 4968874 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.57 | 33.0 | 3.00e-01 | 97.7% | 40.0% |
| 2010380 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.57 | 34.0 | 3.26e-01 | 96.6% | 50.5% |
| 4977180 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.55 | 32.0 | 3.13e-01 | 95.4% | 49.0% |
| 4988640 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.54 | 33.0 | 3.12e-01 | 97.7% | 47.3% |
| 355456 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.54 | 32.0 | 2.99e-01 | 98.9% | 45.8% |
| 3279676 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.51 | 31.0 | 2.86e-01 | 98.9% | 43.5% |
| 1305 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.50 | 32.0 | 2.95e-01 | 96.6% | 49.1% |
D8
medium
residues 857-921
Domain cluster:
representative