IMGVR_UViG_3300017718_000616-3300017718-Ga0181375_10004441

Arc-Vir

Identity

73.7 mean pLDDT

View cluster (3 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-99

PDB

Domain cluster: rep: Filtrate_w_scaffold_6_prodigal-single.1__X__X__00314__D95-163

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07230.17 best	Portal_T4	127.2	1.10e-36	100.0%	16.0%

D2 high residues 134-202

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07230.17 best	Portal_T4	69.2	4.30e-19	100.0%	15.8%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4144025	129.1.1.9 ↗	alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_Gly3P_dh_C	0.69	49.0	3.74e-01	73.9%	41.3%
5044640	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.69	47.0	3.76e-01	72.5%	36.4%
3169106	130.1.1.0 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif	0.68	47.0	4.39e-01	72.5%	58.8%
3727064	5069.1.3.6 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › MCP1_TM	0.66	49.0	3.33e-01	81.2%	30.0%

D3 high residues 203-260

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07230.17 best	Portal_T4	38.4	9.00e-10	98.3%	12.1%

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5svlA01	1.10.287.940	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel	0.69	46.0	4.43e-01	74.1%	60.3%
1lrzA03	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.59	43.0	4.25e-01	79.3%	75.8%
2ebzA02	1.10.167.10	Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2	0.58	46.0	4.18e-01	89.7%	70.4%
1gaxA05	1.10.287.380	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain	0.55	39.0	3.71e-01	79.3%	61.6%
1vw4T01	6.10.330.20	Special › Helix non-globular › Monooxygenase ›	0.55	38.0	3.18e-01	79.3%	39.3%
1b04A03	1.10.287.610	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.55	45.0	4.47e-01	93.1%	98.4%
4aaiA01	1.10.1220.150	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant ›	0.54	39.0	3.98e-01	77.6%	91.2%
2lqlA02	1.10.287.2900	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.52	34.0	3.57e-01	72.4%	86.4%
3t57A02	1.20.1180.10	Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain	0.52	44.0	4.10e-01	100.0%	80.0%
3c7mA00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.50	40.0	2.98e-01	100.0%	35.4%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1196998	3009.1.1.0 ↗	alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like	0.53	41.0	3.84e-01	91.4%	73.4%
3994468	3922.1.1.0 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3	0.53	38.0	3.63e-01	79.3%	64.3%
184818	568.1.1.4 ↗	few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related › CHCH	0.52	34.0	3.56e-01	72.4%	84.4%