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IMGVR_UViG_3300017746_000056-3300017746-Ga0181389_10000689
Arc-VirIMGVR_UViG_3300017746_000056-3300017746-Ga0181389_10000689
Identity
- Kingdom:
- archaea
Quality
87.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 582-686
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 32.0 | 4.08e-01 | 76.2% | 84.2% |
| 2ztnA02 | 2.40.30.190 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.64 | 58.0 | 5.26e-01 | 99.0% | 83.7% |
| 3w1eA03 | 2.40.10.410 | Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain | 0.62 | 48.0 | 5.15e-01 | 100.0% | 100.0% |
| 1vq8Q00 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.58 | 38.0 | 4.03e-01 | 99.0% | 72.6% |
| 2h6cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 33.0 | 3.16e-01 | 98.1% | 45.7% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 31.0 | 3.75e-01 | 79.0% | 84.6% |
| 1yelA00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.56 | 42.0 | 4.29e-01 | 98.1% | 83.3% |
| 3bcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 35.0 | 3.58e-01 | 99.0% | 65.4% |
| 2z69B00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 34.0 | 3.06e-01 | 99.0% | 43.3% |
| 1jb0D00 | 3.30.1470.10 | Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II | 0.54 | 28.0 | 2.58e-01 | 96.2% | 37.0% |
| 3ua0A00 | 6.20.280.10 | Special › Other non-globular › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.53 | 25.0 | 2.83e-01 | 75.2% | 53.2% |
| 2v4dE01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.53 | 34.0 | 3.73e-01 | 93.3% | 82.1% |
| 1sg5A01 | 2.30.30.400 | Mainly Beta › Roll › SH3 type barrels. › Rof-like | 0.53 | 34.0 | 3.83e-01 | 87.6% | 89.6% |
| 1omiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 32.0 | 3.29e-01 | 100.0% | 61.0% |
| 4i1kA00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.52 | 41.0 | 3.96e-01 | 98.1% | 75.4% |
| 2q30A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 35.0 | 3.79e-01 | 100.0% | 84.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4552969 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.60 | 39.0 | 4.17e-01 | 92.4% | 77.3% |
| 3969466 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 37.0 | 3.54e-01 | 99.0% | 57.5% |
| 4950522 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.55 | 29.0 | 3.77e-01 | 73.3% | 96.4% |
| 3388764 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 48.0 | 4.44e-01 | 99.0% | 88.9% |
| 5023390 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 44.0 | 4.54e-01 | 100.0% | 94.0% |
| 3685657 | 11.1.1.203 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 | 0.53 | 47.0 | 4.36e-01 | 100.0% | 90.4% |
| 3779679 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.53 | 34.0 | 2.44e-01 | 99.0% | 21.6% |
| 3635125 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.52 | 38.0 | 3.25e-01 | 74.3% | 79.9% |
| 3275318 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.52 | 39.0 | 3.60e-01 | 100.0% | 60.7% |
| 4674853 | 6.1.1.11 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Fascin | 0.51 | 39.0 | 3.67e-01 | 79.0% | 100.0% |
| 3935385 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 36.0 | 3.56e-01 | 100.0% | 68.1% |
| 3522892 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.51 | 34.0 | 3.58e-01 | 100.0% | 78.9% |
| 3964188 | 1.1.7.80 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RND-MFP_C | 0.51 | 34.0 | 3.86e-01 | 93.3% | 97.3% |
| 5043602 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 35.0 | 3.67e-01 | 100.0% | 82.1% |
D3
medium
residues 63-176
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.78 | 47.0 | 5.23e-01 | 86.8% | 76.7% |
| 1i8dC02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 45.0 | 5.05e-01 | 91.2% | 93.2% |
| 3a35A01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.64 | 47.0 | 5.11e-01 | 92.1% | 93.5% |
| 4b43A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 45.0 | 4.49e-01 | 86.8% | 73.0% |
| 4g6iB01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 44.0 | 4.91e-01 | 87.7% | 94.4% |
| 4g6iC02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.62 | 46.0 | 5.05e-01 | 91.2% | 95.7% |
| 2m5sA00 | 2.40.30.240 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 51.0 | 4.98e-01 | 88.6% | 99.2% |
| 1kzlA02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.60 | 47.0 | 4.99e-01 | 93.9% | 94.1% |
| 4g1vA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 45.0 | 4.54e-01 | 86.8% | 97.5% |
| 2zuvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 38.0 | 3.96e-01 | 86.8% | 77.4% |
| 2d9rA00 | 2.40.30.100 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › AF2212/PG0164-like | 0.54 | 39.0 | 4.38e-01 | 86.8% | 100.0% |
| 1cqxA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 43.0 | 4.43e-01 | 86.8% | 95.5% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 43.0 | 4.52e-01 | 86.0% | 99.0% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 43.0 | 4.54e-01 | 88.6% | 99.0% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.51 | 36.0 | 3.73e-01 | 89.5% | 76.1% |
| 1bvoA00 | 2.60.40.340 | Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain | 0.51 | 42.0 | 3.71e-01 | 91.2% | 93.1% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3291083 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.71 | 53.0 | 6.02e-01 | 90.4% | 97.8% |
| 4999166 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 42.0 | 4.99e-01 | 85.1% | 97.3% |
| 4055490 | 1.1.7.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding | 0.66 | 47.0 | 5.24e-01 | 87.7% | 94.4% |
| 4034156 | 1.1.7.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding | 0.65 | 47.0 | 5.18e-01 | 90.4% | 94.4% |
| 3667743 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.62 | 44.0 | 4.25e-01 | 86.8% | 64.6% |
| 4655249 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.62 | 44.0 | 4.21e-01 | 87.7% | 63.0% |
| None | — | 0.62 | 44.0 | 3.50e-01 | 87.7% | 37.0% | |
| 4410283 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.62 | 44.0 | 4.33e-01 | 86.8% | 68.0% |
| 3259057 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.62 | 39.0 | 4.45e-01 | 90.4% | 90.0% |
| 3265294 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.60 | 39.0 | 4.33e-01 | 90.4% | 85.9% |
| 98 | 1.1.7.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding | 0.60 | 46.0 | 4.69e-01 | 91.2% | 81.4% |
| 3264741 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.60 | 37.0 | 4.11e-01 | 90.4% | 78.9% |
| 3250137 | 11.1.1.820 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd | 0.60 | 38.0 | 4.28e-01 | 90.4% | 85.9% |
| 3250349 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 39.0 | 4.25e-01 | 90.4% | 82.1% |
| 3251963 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 37.0 | 3.95e-01 | 90.4% | 72.0% |
| 3260355 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.58 | 41.0 | 4.30e-01 | 90.4% | 83.0% |
| 3257691 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.58 | 39.0 | 4.31e-01 | 90.4% | 88.9% |
| 4623074 | 1.1.7.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding | 0.56 | 48.0 | 4.87e-01 | 93.9% | 95.5% |
| 3339179 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.56 | 39.0 | 4.16e-01 | 89.5% | 86.3% |
| 3945749 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 44.0 | 4.64e-01 | 86.0% | 97.0% |
| 4004549 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.55 | 44.0 | 4.62e-01 | 86.0% | 97.0% |
| 2171578 | 1.2.1.2 ↗ | beta barrels › cradle loop barrel › Capsid protein protrusion (P) domain › Capsid protein protrusion (P) domain › Calici_coat_C | 0.54 | 43.0 | 4.12e-01 | 86.8% | 81.8% |
| 5031113 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.54 | 29.0 | 3.32e-01 | 83.3% | 71.2% |
| 3442209 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.54 | 44.0 | 4.41e-01 | 87.7% | 95.7% |
| 3619929 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 38.0 | 4.13e-01 | 90.4% | 91.6% |
| 3614175 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 27.0 | 2.79e-01 | 77.2% | 48.2% |
| 4391338 | 240.2.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit › RNA_pol_A_bac | 0.52 | 30.0 | 2.96e-01 | 96.5% | 50.8% |
| 3765958 | 189.1.1.0 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP | 0.51 | 37.0 | 2.42e-01 | 90.4% | 16.4% |
D4
medium
residues 239-320_403-414
Domain cluster:
rep: KU873925.1__AND75135.1__pf16_212__00211__D127-217_359-371
CATH (46)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.62 | 41.0 | 4.49e-01 | 90.4% | 84.0% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.61 | 43.0 | 4.28e-01 | 72.3% | 75.8% |
| 2pb7A01 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.61 | 45.0 | 3.65e-01 | 77.7% | 63.8% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 40.0 | 4.53e-01 | 85.1% | 90.3% |
| 3q0bX00 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.60 | 45.0 | 3.92e-01 | 80.9% | 58.1% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.60 | 45.0 | 3.82e-01 | 80.9% | 63.1% |
| 1twfB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.60 | 41.0 | 3.72e-01 | 70.2% | 90.3% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.59 | 45.0 | 4.64e-01 | 97.9% | 85.7% |
| 4nohA01 | 3.30.70.3060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 40.0 | 4.56e-01 | 98.9% | 93.0% |
| 4labA00 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.59 | 44.0 | 3.62e-01 | 100.0% | 41.2% |
| 2pmzB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.58 | 40.0 | 3.68e-01 | 71.3% | 100.0% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.57 | 43.0 | 3.53e-01 | 79.8% | 82.8% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 39.0 | 4.32e-01 | 85.1% | 91.7% |
| 5d77A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 42.0 | 4.49e-01 | 97.9% | 91.5% |
| 2cqiA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 44.0 | 4.32e-01 | 100.0% | 76.7% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 41.0 | 4.23e-01 | 100.0% | 81.1% |
| 2dgxA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 44.0 | 4.71e-01 | 98.9% | 100.0% |
| 1l2mA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.56 | 45.0 | 4.18e-01 | 96.8% | 68.6% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 4.01e-01 | 94.7% | 67.9% |
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 40.0 | 4.27e-01 | 97.9% | 93.4% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 4.24e-01 | 91.5% | 84.9% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 48.0 | 4.61e-01 | 97.9% | 94.5% |
| 4tpvA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.55 | 40.0 | 3.27e-01 | 76.6% | 56.6% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 41.0 | 4.39e-01 | 98.9% | 96.2% |
| 2vfrA03 | 3.30.70.2530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 37.0 | 3.82e-01 | 98.9% | 74.7% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 35.0 | 3.62e-01 | 77.7% | 69.0% |
| 4lfhD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 39.0 | 4.09e-01 | 95.7% | 82.4% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.55 | 43.0 | 4.17e-01 | 89.4% | 76.9% |
| 3mdyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 34.0 | 3.27e-01 | 77.7% | 53.6% |
| 4i6yA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.54 | 49.0 | 4.65e-01 | 98.9% | 93.6% |
| 6x4tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 4.27e-01 | 96.8% | 89.4% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 4.22e-01 | 96.8% | 80.0% |
| 1wqsA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 43.0 | 4.26e-01 | 88.3% | 87.4% |
| 1lp9E02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 35.0 | 3.70e-01 | 88.3% | 76.2% |
| 5weeB00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.53 | 38.0 | 3.05e-01 | 75.5% | 58.8% |
| 1r3eA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.53 | 45.0 | 3.52e-01 | 97.9% | 58.8% |
| 3pv7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 4.24e-01 | 94.7% | 86.2% |
| 4liqE05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 4.21e-01 | 96.8% | 84.0% |
| 2go8A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 3.95e-01 | 100.0% | 93.2% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.52 | 42.0 | 3.86e-01 | 91.5% | 67.2% |
| 2apoA03 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 4.26e-01 | 100.0% | 93.5% |
| 4j37A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.51 | 45.0 | 3.61e-01 | 98.9% | 85.8% |
| 2cc6A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.51 | 33.0 | 3.84e-01 | 71.3% | 98.4% |
| 1kskA02 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.51 | 37.0 | 3.12e-01 | 97.9% | 43.7% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.92e-01 | 96.8% | 76.1% |
| 2db9A01 | 3.90.70.200 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Plus-3 domain | 0.51 | 37.0 | 3.39e-01 | 78.7% | 86.5% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3967435 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.67 | 45.0 | 4.51e-01 | 77.7% | 67.4% |
| 3943689 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 44.0 | 4.19e-01 | 79.8% | 57.3% |
| 3968713 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.67 | 42.0 | 4.34e-01 | 76.6% | 66.7% |
| 3974369 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 43.0 | 4.55e-01 | 80.9% | 72.9% |
| 4393593 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.66 | 44.0 | 4.45e-01 | 77.7% | 67.4% |
| 3966429 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.66 | 43.0 | 4.42e-01 | 76.6% | 68.9% |
| 3944430 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 42.0 | 4.09e-01 | 79.8% | 58.1% |
| 3966280 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.66 | 44.0 | 4.42e-01 | 77.7% | 67.4% |
| 4957568 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 44.0 | 4.62e-01 | 77.7% | 76.5% |
| 4944212 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.65 | 54.0 | 5.60e-01 | 96.8% | 96.6% |
| 4247994 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.63 | 45.0 | 4.47e-01 | 79.8% | 70.0% |
| 3836146 | 1.1.9.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA | 0.62 | 47.0 | 4.07e-01 | 80.9% | 66.2% |
| 4217523 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.60 | 43.0 | 3.98e-01 | 79.8% | 57.6% |
| 4976162 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 40.0 | 3.74e-01 | 70.2% | 100.0% |
| 3556801 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.59 | 42.0 | 3.81e-01 | 73.4% | 98.4% |
| 5051220 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 42.0 | 4.32e-01 | 91.5% | 77.8% |
| 4538400 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.59 | 47.0 | 4.21e-01 | 85.1% | 90.0% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.59 | 45.0 | 3.73e-01 | 80.9% | 53.0% |
| 4970832 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 41.0 | 3.78e-01 | 73.4% | 98.4% |
| 1320672 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.59 | 44.0 | 3.28e-01 | 81.9% | 89.0% |
| 5056723 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 44.0 | 4.41e-01 | 92.6% | 78.9% |
| 3511358 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 43.0 | 4.23e-01 | 77.7% | 74.0% |
| 3838081 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 43.0 | 4.38e-01 | 92.6% | 82.2% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.58 | 44.0 | 4.09e-01 | 89.4% | 64.2% |
| 3965956 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.58 | 43.0 | 4.42e-01 | 89.4% | 84.4% |
| 3586477 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 44.0 | 3.65e-01 | 83.0% | 86.3% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.57 | 41.0 | 3.82e-01 | 79.8% | 57.6% |
| 3535347 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 47.0 | 4.46e-01 | 90.4% | 85.2% |
| 4036849 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.57 | 43.0 | 3.82e-01 | 79.8% | 85.0% |
| 2595159 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.57 | 42.0 | 3.58e-01 | 80.9% | 51.2% |
| 4929587 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.57 | 41.0 | 4.17e-01 | 77.7% | 78.9% |
| 1914511 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.57 | 43.0 | 3.97e-01 | 83.0% | 82.7% |
| 3971461 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 43.0 | 4.42e-01 | 89.4% | 87.8% |
| 5043359 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.56 | 40.0 | 4.52e-01 | 77.7% | 100.0% |
| 3909822 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 47.0 | 4.54e-01 | 93.6% | 87.3% |
| 4551243 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.56 | 43.0 | 4.00e-01 | 85.1% | 90.4% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.56 | 40.0 | 4.14e-01 | 77.7% | 82.6% |
| 4931484 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.55 | 48.0 | 3.69e-01 | 97.9% | 48.9% |
| 4562905 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.55 | 42.0 | 3.92e-01 | 84.0% | 90.4% |
| 4945745 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.55 | 48.0 | 3.56e-01 | 97.9% | 43.0% |
| 4103990 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.55 | 48.0 | 3.64e-01 | 97.9% | 46.5% |
| 4094235 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.55 | 42.0 | 3.86e-01 | 81.9% | 87.2% |
| 4880925 | 304.102.1.0 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase | 0.55 | 42.0 | 3.94e-01 | 100.0% | 65.5% |
| 3428351 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.55 | 47.0 | 3.79e-01 | 97.9% | 47.2% |
| 5024648 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.54 | 47.0 | 3.60e-01 | 97.9% | 46.5% |
| 5063453 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.54 | 47.0 | 3.52e-01 | 97.9% | 44.1% |
| 4933784 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.54 | 47.0 | 3.61e-01 | 97.9% | 48.0% |
| 3991838 | 389.1.1.47 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › TIL_2 | 0.53 | 33.0 | 3.93e-01 | 72.3% | 92.1% |
| 3595076 | 304.102.1.0 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase | 0.53 | 46.0 | 3.38e-01 | 97.9% | 36.7% |
| 3220081 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.53 | 46.0 | 3.41e-01 | 97.9% | 42.1% |
| 5019301 | 304.102.1.13 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_C_2 | 0.53 | 47.0 | 3.51e-01 | 100.0% | 76.0% |
| 3990367 | 389.4.1.7 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 | 0.53 | 33.0 | 3.56e-01 | 73.4% | 72.5% |
| 5033279 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.53 | 46.0 | 3.52e-01 | 100.0% | 78.8% |
| 3541435 | 271.1.1.5 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › G2F | 0.53 | 36.0 | 2.77e-01 | 71.3% | 80.4% |
| 3232202 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 46.0 | 4.05e-01 | 96.8% | 82.9% |
| 4077036 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.53 | 45.0 | 3.50e-01 | 97.9% | 42.2% |
| 3500586 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.53 | 46.0 | 3.40e-01 | 98.9% | 62.7% |
| 5001314 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.53 | 45.0 | 3.42e-01 | 97.9% | 39.6% |
| 4943623 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 4.21e-01 | 89.4% | 86.0% |
| 4462724 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.52 | 45.0 | 3.45e-01 | 97.9% | 56.2% |
| 4943359 | 304.102.1.13 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_C_2 | 0.52 | 46.0 | 3.50e-01 | 100.0% | 80.4% |
| 4646504 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.52 | 45.0 | 3.59e-01 | 97.9% | 56.0% |
| 4254454 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.52 | 45.0 | 3.39e-01 | 98.9% | 51.4% |
| 4002415 | 389.2.1.3 ↗ | few secondary structure elements › EGF-like › Serine protease inhibitors › Serine protease inhibitors › TIL_2 | 0.52 | 32.0 | 3.81e-01 | 72.3% | 89.2% |
| 5036917 | 304.102.1.13 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_C_2 | 0.52 | 45.0 | 3.90e-01 | 97.9% | 64.7% |
| 4557453 | 304.102.1.9 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N, DKCLD, TruB_C_2, Pus10_C | 0.52 | 46.0 | 3.43e-01 | 100.0% | 76.3% |
| 3910402 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.52 | 45.0 | 3.38e-01 | 97.9% | 53.1% |
| 4503008 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.52 | 45.0 | 3.61e-01 | 100.0% | 56.0% |
| 4319057 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.51 | 45.0 | 4.23e-01 | 96.8% | 98.3% |
| 5043875 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.51 | 44.0 | 3.30e-01 | 98.9% | 47.7% |
| 4126423 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.50 | 44.0 | 3.42e-01 | 98.9% | 51.6% |
| 4223490 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.50 | 44.0 | 3.44e-01 | 100.0% | 73.0% |
D5
medium
residues 321-402
Domain cluster:
rep: NC_048679.1__YP_009835506.1__HWB34_gp31__00031__D132-209
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3okxB00 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.74 | 59.0 | 4.83e-01 | 86.6% | 83.9% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.74 | 59.0 | 6.06e-01 | 87.8% | 97.5% |
| 3e1yE01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.73 | 61.0 | 6.03e-01 | 90.2% | 98.8% |
| 1vq8B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.73 | 59.0 | 5.00e-01 | 89.0% | 84.7% |
| 3qtgA02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.72 | 58.0 | 5.62e-01 | 89.0% | 94.7% |
| 2v31A01 | 2.40.30.180 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain | 0.71 | 57.0 | 5.46e-01 | 89.0% | 83.5% |
| 7syvx01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.70 | 58.0 | 4.89e-01 | 91.5% | 75.9% |
| 3t05A02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.69 | 56.0 | 5.28e-01 | 87.8% | 95.9% |
| 2greF02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.68 | 54.0 | 5.56e-01 | 85.4% | 100.0% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.68 | 49.0 | 4.31e-01 | 76.8% | 75.0% |
| 1vhkA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.67 | 47.0 | 4.94e-01 | 73.2% | 94.5% |
| 3kl9A02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.67 | 50.0 | 5.24e-01 | 80.5% | 100.0% |
| 1mrzB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.66 | 53.0 | 4.84e-01 | 87.8% | 67.0% |
| 4lusB01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.66 | 55.0 | 4.50e-01 | 90.2% | 61.1% |
| 2nv4A00 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.66 | 52.0 | 4.50e-01 | 86.6% | 90.2% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 46.0 | 3.83e-01 | 73.2% | 67.1% |
| 2j5uA02 | 2.40.10.340 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 | 0.64 | 52.0 | 5.19e-01 | 89.0% | 94.0% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.63 | 50.0 | 4.23e-01 | 86.6% | 69.6% |
| 5h7jA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 48.0 | 4.44e-01 | 84.1% | 71.3% |
| 3hrpA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 50.0 | 4.78e-01 | 90.2% | 80.0% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.61 | 52.0 | 3.81e-01 | 95.1% | 40.2% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.59 | 47.0 | 4.73e-01 | 90.2% | 98.8% |
| 2wz8A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 45.0 | 3.89e-01 | 87.8% | 99.3% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 37.0 | 4.20e-01 | 86.6% | 98.2% |
| 4lduA02 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.56 | 45.0 | 4.21e-01 | 90.2% | 91.5% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.56 | 45.0 | 4.11e-01 | 87.8% | 89.9% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 43.0 | 4.37e-01 | 89.0% | 86.3% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 43.0 | 4.19e-01 | 87.8% | 78.1% |
| 3bn6A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 42.0 | 3.47e-01 | 85.4% | 95.6% |
| 1xffA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 46.0 | 3.41e-01 | 98.8% | 57.6% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 43.0 | 4.13e-01 | 90.2% | 86.5% |
| 3fw6A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 40.0 | 3.65e-01 | 87.8% | 56.4% |
| 4jx0A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 43.0 | 3.62e-01 | 87.8% | 53.1% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.53 | 42.0 | 3.80e-01 | 87.8% | 74.4% |
| 5hbaA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 41.0 | 3.60e-01 | 86.6% | 91.0% |
| 2r7eB03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 42.0 | 3.47e-01 | 87.8% | 56.1% |
| 4gklA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 39.0 | 3.84e-01 | 89.0% | 75.0% |
| 6euaA01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.52 | 41.0 | 3.54e-01 | 89.0% | 97.1% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 40.0 | 3.51e-01 | 86.6% | 90.2% |
| 3hnmA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 40.0 | 3.32e-01 | 87.8% | 47.9% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 38.0 | 4.04e-01 | 84.1% | 95.7% |
| 2j1aA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 40.0 | 3.46e-01 | 87.8% | 53.9% |
| 1nc7A00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.51 | 40.0 | 3.63e-01 | 87.8% | 70.7% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 4.00e-01 | 90.2% | 88.5% |
| 4pibA00 | 2.60.40.3910 | Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein | 0.51 | 35.0 | 2.86e-01 | 73.2% | 83.9% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 35.0 | 3.85e-01 | 90.2% | 95.2% |
| 6mjjC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.64e-01 | 89.0% | 84.2% |
| 3es1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 31.0 | 2.73e-01 | 87.8% | 39.7% |
| 5h4cB00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 39.0 | 3.44e-01 | 89.0% | 93.3% |
ECOD (74)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5078307 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.86 | 70.0 | 7.37e-01 | 86.6% | 100.0% |
| 3272448 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.85 | 71.0 | 6.77e-01 | 89.0% | 87.4% |
| 4217174 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.83 | 64.0 | 6.82e-01 | 87.8% | 94.3% |
| 5056460 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.83 | 67.0 | 7.00e-01 | 89.0% | 93.3% |
| 3513769 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 68.0 | 7.15e-01 | 87.8% | 96.0% |
| 5079674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.79 | 64.0 | 6.71e-01 | 87.8% | 94.7% |
| 5078309 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.79 | 67.0 | 6.80e-01 | 90.2% | 100.0% |
| 3512272 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.79 | 65.0 | 6.78e-01 | 87.8% | 97.3% |
| 5037173 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.78 | 64.0 | 6.13e-01 | 89.0% | 90.5% |
| 3973332 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.78 | 64.0 | 6.69e-01 | 90.2% | 97.3% |
| 4026674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.77 | 63.0 | 6.46e-01 | 87.8% | 92.5% |
| 4194551 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.77 | 60.0 | 6.26e-01 | 87.8% | 92.0% |
| 4066146 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 61.0 | 5.58e-01 | 87.8% | 66.7% |
| 4060488 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 60.0 | 6.08e-01 | 87.8% | 86.3% |
| 4245518 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 59.0 | 6.15e-01 | 87.8% | 92.0% |
| 5051090 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.75 | 58.0 | 5.90e-01 | 87.8% | 85.0% |
| 3944437 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 62.0 | 6.32e-01 | 89.0% | 96.2% |
| 4338601 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 58.0 | 5.68e-01 | 89.0% | 76.7% |
| 4890345 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 59.0 | 5.91e-01 | 87.8% | 84.7% |
| 3273358 | 1.1.7.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › TrmO | 0.73 | 60.0 | 5.00e-01 | 87.8% | 87.0% |
| 5081809 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 54.0 | 5.91e-01 | 82.9% | 98.5% |
| 1790393 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 60.0 | 6.05e-01 | 89.0% | 89.0% |
| 4166012 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 58.0 | 6.08e-01 | 87.8% | 96.0% |
| 4235076 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 57.0 | 5.76e-01 | 87.8% | 86.3% |
| 4943366 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 58.0 | 5.79e-01 | 87.8% | 88.2% |
| 3904189 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 58.0 | 5.48e-01 | 87.8% | 72.0% |
| 4350337 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 58.0 | 6.04e-01 | 87.8% | 96.0% |
| 4162532 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 57.0 | 5.95e-01 | 87.8% | 93.3% |
| 4011239 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 58.0 | 5.89e-01 | 87.8% | 90.0% |
| 4403870 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 57.0 | 5.43e-01 | 87.8% | 73.7% |
| 4080130 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 57.0 | 5.92e-01 | 86.6% | 94.7% |
| 5076995 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 57.0 | 5.79e-01 | 87.8% | 91.3% |
| 4379635 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.71 | 57.0 | 5.47e-01 | 87.8% | 95.8% |
| 4083044 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.70 | 56.0 | 5.81e-01 | 87.8% | 100.0% |
| 4883586 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 55.0 | 5.43e-01 | 87.8% | 87.2% |
| 4064427 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 53.0 | 5.20e-01 | 86.6% | 95.6% |
| 3845669 | 11.1.1.396 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Anth_Ig | 0.62 | 49.0 | 4.75e-01 | 89.0% | 89.5% |
| 3265105 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.62 | 50.0 | 4.78e-01 | 89.0% | 85.3% |
| 3273842 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 49.0 | 4.87e-01 | 87.8% | 87.1% |
| 3267672 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 48.0 | 4.81e-01 | 90.2% | 84.7% |
| 1030933 | 1.1.7.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › End_beta_barrel | 0.61 | 48.0 | 4.77e-01 | 89.0% | 97.8% |
| 3265709 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.61 | 48.0 | 4.80e-01 | 89.0% | 85.9% |
| 2868330 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.60 | 45.0 | 3.31e-01 | 81.7% | 53.6% |
| 5040690 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 46.0 | 4.45e-01 | 85.4% | 80.0% |
| 3256398 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 48.0 | 4.61e-01 | 90.2% | 83.2% |
| 3753826 | 11.1.1.396 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Anth_Ig | 0.59 | 46.0 | 4.52e-01 | 87.8% | 90.0% |
| 5042583 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.59 | 47.0 | 4.51e-01 | 90.2% | 91.6% |
| 4077102 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.58 | 46.0 | 4.20e-01 | 90.2% | 73.9% |
| 5002657 | 12.1.1.114 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF2341 | 0.58 | 46.0 | 4.55e-01 | 87.8% | 95.3% |
| 3883513 | 11.1.1.185 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DBB | 0.57 | 45.0 | 4.16e-01 | 87.8% | 70.0% |
| 4617893 | 11.1.1.185 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DBB | 0.57 | 45.0 | 4.08e-01 | 89.0% | 64.2% |
| 3898502 | 12.5.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › FIIND | 0.57 | 45.0 | 3.88e-01 | 87.8% | 57.0% |
| 3619352 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 44.0 | 3.62e-01 | 86.6% | 66.3% |
| 3585284 | 10.40.1.1 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR | 0.56 | 45.0 | 3.50e-01 | 89.0% | 56.8% |
| 3484822 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.55 | 41.0 | 4.16e-01 | 90.2% | 81.2% |
| 4047081 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 42.0 | 4.22e-01 | 87.8% | 82.4% |
| 3924218 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 41.0 | 3.80e-01 | 87.8% | 60.9% |
| 3249778 | 11.1.1.914 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29344 | 0.54 | 42.0 | 4.15e-01 | 91.5% | 80.0% |
| 3738959 | 11.1.1.643 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_POM152 | 0.53 | 43.0 | 4.15e-01 | 90.2% | 88.4% |
| 3251202 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 3.61e-01 | 85.4% | 57.7% |
| 3263950 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.52 | 41.0 | 3.59e-01 | 89.0% | 74.8% |
| 3627438 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.52 | 41.0 | 4.03e-01 | 90.2% | 84.4% |
| 5042823 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 41.0 | 3.89e-01 | 90.2% | 78.1% |
| 3880283 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 40.0 | 4.00e-01 | 90.2% | 87.8% |
| 1209287 | 10.32.1.86 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C_2 | 0.51 | 41.0 | 3.48e-01 | 87.8% | 52.9% |
| 5038652 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 40.0 | 3.74e-01 | 86.6% | 73.3% |
| 4932670 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 39.0 | 3.82e-01 | 86.6% | 84.2% |
| 3877957 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.51 | 41.0 | 3.95e-01 | 91.5% | 85.3% |
| 4958378 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 36.0 | 3.65e-01 | 79.3% | 74.1% |
| 3988748 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.51 | 40.0 | 3.37e-01 | 87.8% | 51.7% |
| 5047244 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 39.0 | 3.78e-01 | 90.2% | 83.0% |
| 3571185 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.50 | 40.0 | 3.86e-01 | 90.2% | 80.0% |
| 3528773 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.50 | 40.0 | 3.95e-01 | 90.2% | 84.4% |
| 3970514 | 11.1.1.1065 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF25971 | 0.50 | 39.0 | 3.76e-01 | 90.2% | 80.0% |
D6
medium
residues 456-564
Domain cluster:
rep: NC_070960.1__YP_010669387.1__PQC10_gp188__00125__D240-345
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.77 | 47.0 | 5.16e-01 | 70.6% | 74.4% |
| 2m5sA00 | 2.40.30.240 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.77 | 53.0 | 5.06e-01 | 70.6% | 96.0% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.74 | 50.0 | 5.82e-01 | 71.6% | 100.0% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.74 | 51.0 | 5.20e-01 | 70.6% | 98.1% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.74 | 51.0 | 5.25e-01 | 71.6% | 93.3% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.72 | 50.0 | 5.78e-01 | 71.6% | 100.0% |
| 2dpyA00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 53.0 | 3.49e-01 | 78.0% | 53.3% |
| 1g7sA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.70 | 48.0 | 4.89e-01 | 70.6% | 86.1% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.69 | 54.0 | 5.86e-01 | 84.4% | 97.8% |
| 4wqmA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.69 | 55.0 | 5.77e-01 | 84.4% | 93.9% |
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.68 | 46.0 | 5.26e-01 | 89.9% | 95.0% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.67 | 52.0 | 5.19e-01 | 81.7% | 99.1% |
| 2nv4A00 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.66 | 51.0 | 4.77e-01 | 81.7% | 94.7% |
| 3dclA02 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.63 | 48.0 | 5.26e-01 | 86.2% | 95.6% |
| 1mrzB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.62 | 48.0 | 4.80e-01 | 81.7% | 94.6% |
| 3co8A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.62 | 52.0 | 4.68e-01 | 90.8% | 75.7% |
| 3kw3B01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.62 | 52.0 | 4.69e-01 | 90.8% | 76.2% |
| 4eclA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.61 | 51.0 | 4.61e-01 | 90.8% | 76.8% |
| 4lusB01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.60 | 50.0 | 4.51e-01 | 89.9% | 73.2% |
| 5yycA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.60 | 50.0 | 4.67e-01 | 90.8% | 78.5% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 37.0 | 4.42e-01 | 84.4% | 100.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 34.0 | 4.01e-01 | 80.7% | 84.9% |
| 3hurA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.57 | 50.0 | 4.37e-01 | 96.3% | 68.9% |
| 7mjrA04 | 2.60.40.1790 | Mainly Beta › Sandwich › Immunoglobulin-like › Fungal immunomodulatory protein Fve | 0.56 | 39.0 | 4.14e-01 | 83.5% | 84.8% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 36.0 | 3.93e-01 | 86.2% | 83.9% |
| 1tdqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.95e-01 | 87.2% | 90.0% |
| 1fnfA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.79e-01 | 88.1% | 86.5% |
| 1im3D00 | 2.60.40.1200 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 3.82e-01 | 86.2% | 84.2% |
| 3r8qA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.76e-01 | 87.2% | 86.5% |
| 3tesA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 34.0 | 3.65e-01 | 87.2% | 81.9% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4217174 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.81 | 49.0 | 6.00e-01 | 70.6% | 94.3% |
| 3973332 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.81 | 52.0 | 6.22e-01 | 87.2% | 96.0% |
| 4197746 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.79 | 50.0 | 5.60e-01 | 71.6% | 82.4% |
| 4060488 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.78 | 50.0 | 5.80e-01 | 71.6% | 88.7% |
| 4197108 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.78 | 50.0 | 5.48e-01 | 72.5% | 78.9% |
| 4317928 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.77 | 54.0 | 5.74e-01 | 71.6% | 97.9% |
| 4477675 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.77 | 54.0 | 5.57e-01 | 72.5% | 88.6% |
| 4303291 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.77 | 55.0 | 5.74e-01 | 73.4% | 92.0% |
| 3904189 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.77 | 51.0 | 5.39e-01 | 73.4% | 74.0% |
| 4011239 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 51.0 | 5.90e-01 | 72.5% | 92.5% |
| 4162532 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.77 | 51.0 | 5.99e-01 | 73.4% | 97.3% |
| 4166012 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.77 | 52.0 | 6.12e-01 | 72.5% | 100.0% |
| 4080130 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.77 | 52.0 | 6.12e-01 | 80.7% | 100.0% |
| 4245518 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.77 | 51.0 | 5.99e-01 | 80.7% | 97.3% |
| 4943366 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 52.0 | 5.85e-01 | 70.6% | 89.4% |
| 3512272 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 51.0 | 6.01e-01 | 85.3% | 98.7% |
| 4890345 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 53.0 | 5.98e-01 | 82.6% | 92.9% |
| 4402716 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 50.0 | 5.65e-01 | 73.4% | 87.1% |
| 4194551 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 49.0 | 5.76e-01 | 73.4% | 94.7% |
| 5076995 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 51.0 | 5.79e-01 | 73.4% | 92.5% |
| 4319764 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 50.0 | 5.06e-01 | 87.2% | 67.3% |
| 3967745 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 50.0 | 5.96e-01 | 71.6% | 98.7% |
| 4066146 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 50.0 | 5.08e-01 | 71.6% | 69.5% |
| 4403870 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.75 | 52.0 | 5.53e-01 | 75.2% | 81.1% |
| 4660673 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.75 | 51.0 | 5.74e-01 | 71.6% | 90.6% |
| 3596497 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 51.0 | 4.75e-01 | 70.6% | 80.7% |
| 1790393 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 50.0 | 5.71e-01 | 84.4% | 92.7% |
| 4636885 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 49.0 | 5.80e-01 | 71.6% | 100.0% |
| 4952899 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 51.0 | 5.79e-01 | 85.3% | 97.5% |
| 2556060 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 49.0 | 5.70e-01 | 71.6% | 96.2% |
| 3597282 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.72 | 49.0 | 5.63e-01 | 71.6% | 95.0% |
| 4064427 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 55.0 | 5.98e-01 | 85.3% | 98.9% |
| 4883586 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 51.0 | 5.61e-01 | 81.7% | 95.3% |
| 5007084 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.70 | 48.0 | 4.90e-01 | 70.6% | 97.1% |
| 4205165 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 48.0 | 5.34e-01 | 71.6% | 97.6% |
| 4010630 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.68 | 53.0 | 3.47e-01 | 81.7% | 26.7% |
| 3273842 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 44.0 | 4.92e-01 | 87.2% | 85.9% |
| 3234172 | 1.1.7.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th | 0.65 | 49.0 | 5.31e-01 | 100.0% | 95.6% |
| 4510320 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.64 | 50.0 | 5.47e-01 | 83.5% | 100.0% |
| 4405079 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.64 | 49.0 | 5.24e-01 | 89.9% | 94.7% |
| 5053561 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 48.0 | 5.21e-01 | 87.2% | 98.9% |
| 127 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.62 | 48.0 | 4.80e-01 | 81.7% | 94.5% |
| 3688796 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 48.0 | 5.18e-01 | 84.4% | 100.0% |
| 3888702 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 40.0 | 4.02e-01 | 71.6% | 78.3% |
| 3259054 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 42.0 | 4.49e-01 | 88.1% | 87.4% |
| 3252787 | 11.1.1.214 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Pur_ac_phosph_N | 0.56 | 39.0 | 3.89e-01 | 70.6% | 74.5% |
| 5003448 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 36.0 | 3.52e-01 | 70.6% | 73.6% |
| 3258896 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 35.0 | 3.76e-01 | 88.1% | 82.1% |
| 5077148 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 36.0 | 3.80e-01 | 88.1% | 81.0% |
| 1558582 | 5092.1.1.6 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Fiber_head_BAdV-4 | 0.51 | 37.0 | 3.68e-01 | 100.0% | 72.2% |
| 3287845 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 36.0 | 3.64e-01 | 84.4% | 73.6% |
| 5047975 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 35.0 | 3.81e-01 | 87.2% | 87.8% |
| 3537016 | 10.3.1.2 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q | 0.50 | 36.0 | 3.46e-01 | 74.3% | 97.6% |
| 3922431 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 40.0 | 4.06e-01 | 99.1% | 90.5% |
D7
medium
residues 827-916
Domain cluster:
rep: IMGVR_UViG_3300017746_000056-3300017746-Ga0181389_10000689__D582-686
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ztnA02 | 2.40.30.190 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.74 | 65.0 | 5.54e-01 | 95.6% | 81.6% |
| 2v31A01 | 2.40.30.180 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain | 0.71 | 57.0 | 5.56e-01 | 96.7% | 79.4% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 40.0 | 4.26e-01 | 74.4% | 75.9% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 51.0 | 4.98e-01 | 94.4% | 82.7% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 40.0 | 4.65e-01 | 76.7% | 95.5% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 40.0 | 4.57e-01 | 75.6% | 96.9% |
| 2m5sA00 | 2.40.30.240 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.58 | 51.0 | 4.64e-01 | 97.8% | 92.7% |
| 4wqmA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 50.0 | 4.92e-01 | 95.6% | 88.8% |
| 3w1eA03 | 2.40.10.410 | Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain | 0.56 | 48.0 | 4.86e-01 | 96.7% | 95.5% |
| 3ufiA01 | 2.60.40.2620 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like | 0.55 | 45.0 | 3.89e-01 | 92.2% | 81.0% |
| 4fdyA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.53 | 36.0 | 3.16e-01 | 81.1% | 46.3% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3488003 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.74 | 61.0 | 6.26e-01 | 94.4% | 91.8% |
| 3332862 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.73 | 58.0 | 5.72e-01 | 94.4% | 80.0% |
| 199114 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.71 | 57.0 | 5.27e-01 | 96.7% | 68.8% |
| 3842233 | 1.1.7.69 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel | 0.62 | 50.0 | 5.08e-01 | 94.4% | 87.8% |
| 3277206 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 43.0 | 4.57e-01 | 80.0% | 82.1% |
| 3291083 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.62 | 51.0 | 5.18e-01 | 97.8% | 91.1% |
| 4514238 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.61 | 45.0 | 4.84e-01 | 92.2% | 91.0% |
| 3250056 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 51.0 | 4.59e-01 | 95.6% | 85.6% |
| 4028731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 41.0 | 4.69e-01 | 78.9% | 100.0% |
| 3510907 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.58 | 44.0 | 4.44e-01 | 92.2% | 81.8% |
| 3805340 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 50.0 | 4.44e-01 | 95.6% | 87.7% |
| 3415428 | 1.1.7.69 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel | 0.57 | 48.0 | 4.57e-01 | 94.4% | 79.0% |
| 4849089 | 2485.3.1.8 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › P22_CoatProtein | 0.57 | 50.0 | 4.62e-01 | 97.8% | 98.3% |
| 4484974 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 43.0 | 4.46e-01 | 84.4% | 87.1% |
| 3240407 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.57 | 41.0 | 4.57e-01 | 77.8% | 97.1% |
| 5035362 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 48.0 | 4.81e-01 | 97.8% | 95.6% |
| 3388764 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 47.0 | 4.15e-01 | 94.4% | 85.9% |
| 4097656 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.55 | 42.0 | 4.16e-01 | 92.2% | 77.9% |
| 3672735 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.55 | 38.0 | 4.30e-01 | 82.2% | 98.5% |
| 3388311 | 1.1.7.100 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PGBA_N | 0.54 | 45.0 | 4.66e-01 | 95.6% | 96.5% |
| 3939997 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.54 | 39.0 | 3.98e-01 | 92.2% | 78.9% |
| 4927416 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.54 | 38.0 | 3.11e-01 | 76.7% | 67.4% |
| 3542883 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 45.0 | 4.00e-01 | 94.4% | 84.4% |
| 3251398 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.53 | 40.0 | 4.08e-01 | 97.8% | 82.2% |
| 3631731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 40.0 | 3.40e-01 | 81.1% | 68.7% |
| 1826904 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.51 | 43.0 | 3.17e-01 | 94.4% | 51.6% |