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IMGVR_UViG_3300017922_000013-3300017922-Ga0182238_10001388
Arc-VirIMGVR_UViG_3300017922_000013-3300017922-Ga0182238_10001388
Identity
- Kingdom:
- archaea
Quality
71.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-107
Domain cluster:
rep: MW651859.1__QSH74591.1__pAN_17__00017__D8-87
D2
medium
residues 482-550
D3
medium
residues 626-669_705-744
Domain cluster:
rep: IMGVR_UViG_3300014206_003187-3300014206-Ga0172377_100411151__D23-94
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xdxA01 | 3.30.1140.40 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 | 0.57 | 34.0 | 3.27e-01 | 79.8% | 50.0% |
| 5xuhA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.53 | 40.0 | 3.53e-01 | 79.8% | 99.2% |
| 1dikA01 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.52 | 38.0 | 3.18e-01 | 78.6% | 77.1% |
| 3hrzC01 | 2.20.210.20 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › | 0.51 | 30.0 | 3.82e-01 | 81.0% | 100.0% |
| 5mw5A01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 37.0 | 3.15e-01 | 79.8% | 95.4% |
| 1sc6A03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.50 | 30.0 | 3.03e-01 | 78.6% | 58.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002641 | 209.1.2.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like | 0.98 | 93.0 | 5.75e-01 | 97.6% | 26.3% |
| 4930688 | 330.2.1.4 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › DUF2113 | 0.59 | 38.0 | 3.50e-01 | 84.5% | 52.4% |
| 4939669 | 330.2.1.4 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › DUF2113 | 0.58 | 36.0 | 3.40e-01 | 84.5% | 52.0% |
| 5071730 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 43.0 | 3.48e-01 | 83.3% | 51.9% |
| 3382396 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 33.0 | 3.33e-01 | 77.4% | 58.8% |
| 5073557 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 42.0 | 3.55e-01 | 84.5% | 62.9% |
| 4999059 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 42.0 | 3.42e-01 | 84.5% | 56.1% |
| 3243502 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.53 | 36.0 | 4.12e-01 | 90.5% | 98.3% |
| 5052687 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.53 | 30.0 | 3.18e-01 | 77.4% | 62.7% |
| 4945126 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 40.0 | 3.47e-01 | 83.3% | 68.5% |
| 4999058 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 40.0 | 3.92e-01 | 85.7% | 91.6% |
| 5044631 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 40.0 | 3.45e-01 | 85.7% | 66.2% |
D4
medium
residues 745-808
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g5bB00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.51 | 35.0 | 2.43e-01 | 71.9% | 32.1% |
| 3oc4B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 42.0 | 3.06e-01 | 93.8% | 63.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002641 | 209.1.2.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like | 0.99 | 96.0 | 5.67e-01 | 100.0% | 17.3% |
| 3578203 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.65 | 43.0 | 3.28e-01 | 100.0% | 29.3% |
| 3629354 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.61 | 38.0 | 3.13e-01 | 100.0% | 32.0% |
| 4854353 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.55 | 29.0 | 3.17e-01 | 84.4% | 60.4% |
| 3569399 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.53 | 26.0 | 3.16e-01 | 90.6% | 70.0% |
| 3495969 | 919.1.1.0 ↗ | few secondary structure elements › Ribosomal protein L36 › Ribosomal protein L36 › Ribosomal protein L36 | 0.52 | 25.0 | 3.01e-01 | 79.7% | 65.1% |
| 7863 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.51 | 35.0 | 2.43e-01 | 71.9% | 32.4% |
| 3601474 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.50 | 42.0 | 2.48e-01 | 96.9% | 48.9% |
D5
medium
residues 809-1019
Domain cluster:
rep: IMGVR_UViG_3300010346_000455-3300010346-Ga0116239_100271902__D370-562
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yu0A03 | 3.90.1580.10 | Alpha Beta › Alpha-Beta Complex › paralog of FGE (formylglycine-generating enzyme) › paralog of FGE (formylglycine-generating enzyme) | 0.68 | 40.0 | 4.34e-01 | 96.7% | 68.2% |
| 1igqB00 | 2.30.30.150 | Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain | 0.51 | 16.0 | 2.86e-01 | 97.6% | 93.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002641 | 209.1.2.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like | 0.98 | 95.0 | 7.54e-01 | 98.6% | 56.6% |
| 4936908 | 209.1.2.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like › FGE-sulfatase | 0.78 | 61.0 | 5.61e-01 | 98.6% | 64.2% |
| 2080140 | 209.1.2.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like › FGE-sulfatase | 0.77 | 74.0 | 5.87e-01 | 99.1% | 70.9% |
| 7356 | 209.1.2.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like | 0.68 | 42.0 | 4.23e-01 | 100.0% | 61.4% |
| 5029394 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.64 | 50.0 | 5.06e-01 | 99.1% | 79.5% |
| 3381251 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 21.0 | 3.45e-01 | 91.5% | 100.0% |