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IMGVR_UViG_3300017929_000360-3300017929-Ga0187849_100051750
Arc-VirIMGVR_UViG_3300017929_000360-3300017929-Ga0187849_100051750
Identity
- Kingdom:
- archaea
Quality
75.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-65
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.72 | 55.0 | 4.81e-01 | 81.4% | 60.5% |
| 8eb0A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 49.0 | 4.30e-01 | 74.6% | 98.8% |
| 1z5bB03 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.68 | 50.0 | 3.76e-01 | 79.7% | 61.7% |
| 3b8cA01 | 1.20.1110.10 | Mainly Alpha › Up-down Bundle › Calcium-transporting ATPase, transmembrane domain › Calcium-transporting ATPase, transmembrane domain | 0.66 | 50.0 | 3.06e-01 | 83.1% | 14.7% |
| 4w88B00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 44.0 | 2.68e-01 | 74.6% | 25.0% |
| 3ga8A00 | 3.10.20.860 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.61 | 43.0 | 4.19e-01 | 74.6% | 88.1% |
| 4zyaB00 | 3.30.1910.20 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain | 0.58 | 42.0 | 3.85e-01 | 76.3% | 88.2% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3593933 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.86 | 59.0 | 4.23e-01 | 76.3% | 28.0% |
| 4959289 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.79 | 61.0 | 5.17e-01 | 83.1% | 74.7% |
| 3180575 | 605.1.1.95 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › TADA2A-like_3rd | 0.72 | 57.0 | 5.17e-01 | 83.1% | 66.7% |
| 3724571 | 375.1.9.8 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › TADA2A-like_3rd | 0.71 | 55.0 | 4.83e-01 | 83.1% | 58.8% |
| 4017358 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.68 | 44.0 | 4.44e-01 | 83.1% | 66.7% |
| 4233291 | 4954.1.1.1 ↗ | a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 | 0.67 | 43.0 | 3.16e-01 | 78.0% | 23.8% |
| 3743904 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.66 | 43.0 | 4.36e-01 | 83.1% | 66.7% |
| 5061445 | 375.1.1.133 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ribbon_3 | 0.66 | 45.0 | 4.25e-01 | 100.0% | 60.0% |
| 5034348 | 210.1.2.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Penicil_amidase | 0.65 | 50.0 | 2.87e-01 | 83.1% | 19.2% |
| 1503124 | 542.1.1.2 ↗ | alpha arrays › Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain › Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain › Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain › eIF4G1-like_eIF4E-bd | 0.58 | 30.0 | 3.51e-01 | 74.6% | 69.4% |
| 3420930 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.58 | 43.0 | 2.98e-01 | 79.7% | 97.0% |
| 4968690 | 109.4.1.3615 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zn_Ribbon_1 | 0.57 | 41.0 | 2.83e-01 | 78.0% | 29.8% |
| 3748183 | 375.1.1.4 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-RanBP | 0.55 | 41.0 | 4.09e-01 | 78.0% | 93.3% |
| 4019692 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.53 | 43.0 | 3.38e-01 | 93.2% | 44.3% |