←Back to structures
IMGVR_UViG_3300017931_000280-3300017931-Ga0187877_10082255
Arc-VirIMGVR_UViG_3300017931_000280-3300017931-Ga0187877_10082255
Identity
- Kingdom:
- archaea
Quality
85.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 27-147_224-264
Domain cluster:
rep: LC644975.1__BCZ76094.1__X__00089__D1-113_213-248
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pnrA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.75 | 60.0 | 5.16e-01 | 83.3% | 100.0% |
| 5egwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.69 | 61.0 | 4.63e-01 | 93.8% | 68.6% |
| 3vkgA18 | 1.10.8.720 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Region D6 of dynein motor | 0.54 | 40.0 | 3.96e-01 | 77.2% | 97.7% |
| 3k3fA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.53 | 43.0 | 3.46e-01 | 88.3% | 77.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2076995 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.74 | 59.0 | 5.12e-01 | 82.1% | 100.0% |
| 4448672 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.73 | 59.0 | 4.69e-01 | 83.3% | 76.6% |
| 3598088 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.53 | 34.0 | 3.73e-01 | 77.8% | 79.2% |
| 3600430 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.52 | 35.0 | 3.76e-01 | 77.2% | 80.0% |
| 4120431 | 190.1.1.7 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › MATalpha_HMGbox | 0.51 | 38.0 | 4.22e-01 | 80.2% | 98.5% |
D2
medium
residues 148-223
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.82 | 52.0 | 4.33e-01 | 100.0% | 39.2% |
| 1sp4B00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.79 | 74.0 | 5.24e-01 | 100.0% | 40.5% |
| 6zq3A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.76 | 70.0 | 4.98e-01 | 100.0% | 39.4% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 48.0 | 5.28e-01 | 100.0% | 81.7% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.75 | 49.0 | 3.93e-01 | 100.0% | 36.2% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.73 | 52.0 | 5.53e-01 | 100.0% | 85.1% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 45.0 | 5.06e-01 | 84.2% | 89.5% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 44.0 | 4.66e-01 | 85.5% | 77.9% |
| 3ervA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.65 | 59.0 | 4.30e-01 | 100.0% | 39.0% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 44.0 | 4.38e-01 | 86.8% | 69.6% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 46.0 | 4.70e-01 | 88.2% | 84.0% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 44.0 | 3.99e-01 | 100.0% | 59.8% |
| 1fx7B03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.52 | 43.0 | 4.24e-01 | 100.0% | 87.5% |
| 4wqkA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.50 | 36.0 | 2.76e-01 | 75.0% | 45.7% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4009281 | 219.1.1.65 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like | 0.86 | 54.0 | 4.83e-01 | 100.0% | 46.7% |
| 3222051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 49.0 | 5.25e-01 | 100.0% | 73.8% |
| 3906939 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.78 | 72.0 | 4.70e-01 | 100.0% | 29.8% |
| 4002498 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 49.0 | 4.58e-01 | 100.0% | 51.6% |
| 3516722 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.78 | 73.0 | 4.20e-01 | 100.0% | 13.4% |
| 3466659 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.78 | 72.0 | 5.01e-01 | 100.0% | 38.7% |
| 4505797 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.76 | 52.0 | 5.53e-01 | 100.0% | 81.5% |
| 3231153 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 48.0 | 4.05e-01 | 100.0% | 39.2% |
| 4124780 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.75 | 51.0 | 5.18e-01 | 100.0% | 72.6% |
| 5034040 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 45.0 | 5.17e-01 | 94.7% | 85.5% |
| 3927363 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 44.0 | 5.23e-01 | 94.7% | 92.0% |
| 4226934 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.73 | 50.0 | 5.30e-01 | 100.0% | 83.1% |
| 4118226 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 50.0 | 5.16e-01 | 98.7% | 80.0% |
| 5036621 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 43.0 | 4.83e-01 | 98.7% | 85.5% |
| 4527355 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.68 | 47.0 | 4.93e-01 | 100.0% | 79.7% |
| 4660084 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.68 | 48.0 | 5.02e-01 | 100.0% | 81.2% |
| 3623786 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.68 | 46.0 | 4.91e-01 | 86.8% | 81.5% |
| 3512420 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.68 | 47.0 | 4.52e-01 | 88.2% | 63.5% |
| 4476045 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.68 | 47.0 | 4.87e-01 | 100.0% | 78.6% |
| 4302032 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.68 | 47.0 | 5.05e-01 | 100.0% | 86.2% |
| 5035884 | 2004.6.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › C-terminal domain in a putative metallopeptidase YP_676511.1 › C-terminal domain in a putative metallopeptidase YP_676511.1 › MlrC_C | 0.68 | 47.0 | 3.66e-01 | 98.7% | 32.0% |
| 4299932 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.68 | 47.0 | 4.98e-01 | 97.4% | 84.6% |
| 3523046 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.67 | 45.0 | 4.40e-01 | 86.8% | 62.4% |
| 4429329 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 47.0 | 5.02e-01 | 100.0% | 86.2% |
| 3903323 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.67 | 47.0 | 4.73e-01 | 89.5% | 73.3% |
| 3998645 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.67 | 46.0 | 4.97e-01 | 89.5% | 84.6% |
| 3778124 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.67 | 45.0 | 4.81e-01 | 86.8% | 81.5% |
| 3561462 | 148.1.3.384 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › SH3_2 | 0.66 | 46.0 | 3.54e-01 | 94.7% | 32.9% |
| 3399557 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 50.0 | 5.22e-01 | 100.0% | 91.4% |
| 3713613 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 44.0 | 4.74e-01 | 85.5% | 86.2% |
| 3501560 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 48.0 | 4.59e-01 | 100.0% | 73.3% |
| 4396355 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.60 | 45.0 | 4.37e-01 | 100.0% | 72.9% |
| 3339169 | 4.1.1.415 ↗ | beta barrels › SH3 › SH3 › SH3 › PNPOx_N | 0.59 | 48.0 | 4.63e-01 | 100.0% | 80.0% |
| 4019476 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 46.0 | 3.69e-01 | 90.8% | 69.0% |
| 2410169 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 43.0 | 4.23e-01 | 85.5% | 75.9% |
| 4958690 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 48.0 | 4.01e-01 | 100.0% | 91.1% |
| 3955444 | 2.8.1.1 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C | 0.52 | 38.0 | 4.08e-01 | 89.5% | 92.3% |
| 4169121 | 2.8.1.0 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C | 0.51 | 34.0 | 3.87e-01 | 82.9% | 94.5% |
| 3171984 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 41.0 | 3.24e-01 | 90.8% | 77.0% |