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IMGVR_UViG_3300017938_000525-3300017938-Ga0187854_1000214918
Arc-VirIMGVR_UViG_3300017938_000525-3300017938-Ga0187854_1000214918
Identity
- Kingdom:
- archaea
Quality
91.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-238
Domain cluster:
rep: IMGVR_UViG_3300009645_000049-3300009645-Ga0116106_10011911__D1-171
D2
high
residues 252-305
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6k6wC01 | 3.40.50.10710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Metallo-hydrolase/oxidoreductase | 0.88 | 81.0 | 5.75e-01 | 100.0% | 36.9% |
| 2d13A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.76 | 66.0 | 5.14e-01 | 100.0% | 45.6% |
| 5c3uA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.70 | 61.0 | 5.08e-01 | 100.0% | 74.0% |
| 2pnqA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.65 | 48.0 | 2.87e-01 | 79.6% | 16.0% |
| 3kw2B02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.60 | 46.0 | 3.39e-01 | 90.7% | 64.7% |
| 3d85C00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 41.0 | 3.20e-01 | 75.9% | 76.7% |
| 2qkdA04 | 2.60.120.1040 | Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain | 0.57 | 41.0 | 3.15e-01 | 77.8% | 45.7% |
| 2wadB03 | 1.10.10.1230 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Penicillin-binding protein, N-terminal non-catalytic domain, head sub-domain | 0.50 | 38.0 | 3.29e-01 | 85.2% | 79.1% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3398349 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.75 | 57.0 | 4.38e-01 | 88.9% | 36.0% |
| 3326967 | 170.1.1.15 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C › Retrotran_gag_2 | 0.64 | 46.0 | 4.08e-01 | 77.8% | 82.5% |
| 3635012 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.58 | 40.0 | 3.16e-01 | 72.2% | 72.5% |
| 4983481 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.58 | 44.0 | 3.76e-01 | 87.0% | 69.5% |
| 2141651 | 913.1.1.5 ↗ | few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › PF29282 | 0.52 | 42.0 | 3.42e-01 | 100.0% | 57.9% |