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IMGVR_UViG_3300017941_000382-3300017941-Ga0187850_100062526

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300017941_000382-3300017941-Ga0187850_100062526 ↗
Kingdom:: archaea

Quality

84.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 12-95

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3zliA02	1.20.58.1370	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.79	37.0	3.72e-01	72.6%	44.7%
2rdcA00	1.10.287.800	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242	0.76	42.0	3.52e-01	98.8%	34.6%
8ctsB01	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.62	43.0	4.29e-01	72.6%	88.5%
2ozbB01	1.10.287.4070	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.61	43.0	3.71e-01	73.8%	61.8%
5b55A01	3.40.50.1100	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.61	48.0	3.63e-01	83.3%	48.9%
4ioeA00	1.10.287.850	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain	0.60	41.0	4.14e-01	73.8%	69.0%
1ywfA00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.58	48.0	3.50e-01	91.7%	52.3%
4n5xA01	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.57	39.0	4.07e-01	86.9%	75.0%
4dciA00	6.10.140.1110	Special › Helix non-globular › Helix Hairpins ›	0.55	40.0	3.26e-01	73.8%	46.9%
4hehA01	1.10.1240.10	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain	0.55	33.0	3.35e-01	90.5%	60.2%
3fixA00	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.52	40.0	3.23e-01	83.3%	42.4%
1v4aA01	1.10.4050.10	Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE	0.52	35.0	3.24e-01	77.4%	53.2%
1r6bX03	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.52	37.0	3.70e-01	76.2%	76.1%

ECOD (18)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4263341	192.7.1.2 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N	0.69	39.0	3.54e-01	73.8%	40.9%
5050506	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.67	49.0	4.94e-01	76.2%	87.1%
4424778	605.2.1.3 ↗	alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N	0.65	40.0	3.67e-01	71.4%	48.2%
5022013	632.7.1.61 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › BREX_BrxC_helical	0.65	40.0	3.52e-01	83.3%	42.5%
4959229	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.61	43.0	3.32e-01	73.8%	72.6%
5005257	2.21.1.0 ↗	beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB)	0.60	45.0	3.58e-01	83.3%	39.4%
3489683	198.1.1.0 ↗	alpha arrays › Saposin-like › Saposin-like › Saposin-like	0.59	40.0	4.20e-01	86.9%	78.7%
3294636	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.58	42.0	3.77e-01	75.0%	57.4%
3711066	4156.1.1.4 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C	0.57	46.0	3.67e-01	86.9%	86.1%
4067677	3826.1.1.25 ↗	alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › GlutR_dimer	0.57	36.0	3.71e-01	95.2%	67.9%
3593373	4156.1.1.0 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like	0.56	45.0	3.63e-01	86.9%	88.7%
4655075	632.7.1.1 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70	0.55	41.0	4.06e-01	78.6%	84.4%
3961831	103.4.1.7 ↗	alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › DUF1290	0.55	39.0	3.68e-01	75.0%	73.3%
3219466	2484.1.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like	0.55	47.0	3.38e-01	95.2%	55.6%
4582075	632.7.1.1 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70	0.54	43.0	4.20e-01	83.3%	90.0%
3597496	192.4.1.0 ↗	alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p)	0.54	46.0	3.59e-01	94.0%	68.6%
3613914	3922.1.1.0 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3	0.54	38.0	4.05e-01	96.4%	81.3%
4558943	5045.1.1.1 ↗	alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A	0.52	43.0	3.22e-01	95.2%	84.3%