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IMGVR_UViG_3300017949_000213-3300017949-Ga0181584_1000264514
Arc-VirIMGVR_UViG_3300017949_000213-3300017949-Ga0181584_1000264514
Identity
- Kingdom:
- archaea
Quality
74.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 21-54_98-157
Domain cluster:
rep: BML_08042016_1_5m_scaffold_1_curated_closed_gap_prodigal-single.1__X__X__00232__D18-52_95-149
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g29102 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 39.0 | 5.64e-01 | 88.3% | 100.0% |
| 1oxxK02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 37.0 | 5.23e-01 | 88.3% | 100.0% |
| 3rd4B00 | 2.40.50.660 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 38.0 | 4.06e-01 | 93.6% | 84.1% |
| 3anzC00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.54 | 39.0 | 2.77e-01 | 76.6% | 68.7% |
| 1m4uA01 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.50 | 29.0 | 2.69e-01 | 89.4% | 40.3% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4022277 | 328.1.1.3 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 | 0.71 | 36.0 | 3.42e-01 | 76.6% | 40.7% |
| 4230774 | 101.1.9.117 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_assoc | 0.68 | 31.0 | 3.14e-01 | 84.0% | 41.1% |
| 3675745 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.66 | 34.0 | 3.78e-01 | 86.2% | 61.6% |
| 3588663 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.65 | 29.0 | 2.98e-01 | 83.0% | 42.1% |
| 3273636 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.65 | 33.0 | 3.89e-01 | 85.1% | 70.8% |
| 3684690 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.62 | 34.0 | 3.47e-01 | 72.3% | 53.3% |
| 5029609 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.60 | 46.0 | 2.99e-01 | 81.9% | 18.1% |
| 3387999 | 2003.2.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 | 0.56 | 50.0 | 3.77e-01 | 96.8% | 87.3% |
| 4950334 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.54 | 37.0 | 2.66e-01 | 70.2% | 33.9% |
| 3719860 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 31.0 | 2.90e-01 | 87.2% | 45.2% |
| 1943 | 11.13.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › Leukocidin | 0.54 | 39.0 | 2.78e-01 | 76.6% | 68.9% |
| 5054385 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.53 | 34.0 | 3.89e-01 | 86.2% | 87.1% |
| 3238872 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.52 | 37.0 | 2.96e-01 | 74.5% | 91.4% |
| 3739165 | 2004.1.1.176 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Beta-Casp | 0.51 | 29.0 | 2.22e-01 | 79.8% | 23.1% |
| 5011023 | 512.1.1.0 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | 0.51 | 35.0 | 3.72e-01 | 89.4% | 82.5% |
| 4930176 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 41.0 | 2.90e-01 | 86.2% | 34.1% |
| 3942256 | 2004.1.1.552 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T4SS-DNA_transf, TraG-D_C | 0.51 | 42.0 | 2.63e-01 | 91.5% | 83.8% |
| 5019455 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.50 | 40.0 | 3.26e-01 | 88.3% | 91.8% |
| 3991921 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 30.0 | 2.88e-01 | 87.2% | 50.0% |