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IMGVR_UViG_3300017949_000213-3300017949-Ga0181584_100026453
Arc-VirIMGVR_UViG_3300017949_000213-3300017949-Ga0181584_100026453
Identity
- Kingdom:
- archaea
Quality
95.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 38-68
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h7jA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.79 | 63.0 | 4.41e-01 | 100.0% | 81.8% |
| 1q7hA01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.78 | 60.0 | 4.83e-01 | 100.0% | 43.1% |
| 4g59C02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.74 | 59.0 | 3.87e-01 | 100.0% | 22.8% |
| 3khyA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.71 | 54.0 | 3.34e-01 | 87.1% | 21.6% |
| 3r90A00 | 3.10.400.20 | Alpha Beta › Roll › Sulfate adenylyltransferase › | 0.70 | 57.0 | 3.59e-01 | 100.0% | 16.8% |
| 8p2aA01 | 3.90.1010.20 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.68 | 55.0 | 4.20e-01 | 100.0% | 65.5% |
| 3f0zA01 | 3.30.310.260 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.68 | 56.0 | 3.88e-01 | 100.0% | 29.5% |
| 6ioyC02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.67 | 51.0 | 3.18e-01 | 90.3% | 20.9% |
| 7febA01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.65 | 52.0 | 3.59e-01 | 100.0% | 66.2% |
| 4g09A03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 45.0 | 3.90e-01 | 90.3% | 43.6% |
| 4fk1A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 44.0 | 3.20e-01 | 83.9% | 92.0% |
| 6qkgA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 45.0 | 3.18e-01 | 90.3% | 69.4% |
| 3d5lB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 3.13e-01 | 90.3% | 52.0% |
| 4dgkA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 40.0 | 2.67e-01 | 77.4% | 15.1% |
| 1tk7A01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.55 | 42.0 | 4.09e-01 | 96.8% | 75.7% |
| 3fogA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.54 | 41.0 | 3.09e-01 | 100.0% | 99.0% |
| 2egtA01 | 6.20.50.50 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.54 | 37.0 | 3.67e-01 | 96.8% | 100.0% |
| 3gocA00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.51 | 40.0 | 2.48e-01 | 100.0% | 25.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4435348 | 2.1.1.328 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF5440 | 0.81 | 61.0 | 5.10e-01 | 83.9% | 92.7% |
| 4025709 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.80 | 64.0 | 5.25e-01 | 100.0% | 47.7% |
| 4946183 | 243.6.1.12 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA | 0.80 | 66.0 | 5.02e-01 | 100.0% | 40.0% |
| 4957002 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.77 | 62.0 | 4.73e-01 | 100.0% | 42.5% |
| 4978884 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.76 | 57.0 | 4.60e-01 | 100.0% | 40.0% |
| 5049994 | 243.6.1.4 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA | 0.75 | 59.0 | 4.63e-01 | 100.0% | 40.0% |
| 2774201 | 5.1.2.34 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › PQQ_2 | 0.75 | 59.0 | 4.25e-01 | 93.5% | 61.7% |
| 4976671 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.74 | 59.0 | 4.78e-01 | 100.0% | 48.6% |
| 3722666 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 57.0 | 5.24e-01 | 100.0% | 66.7% |
| 3290377 | 5.1.3.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth, SGL, SSL_N | 0.72 | 60.0 | 3.50e-01 | 100.0% | 11.5% |
| 3713384 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.71 | 54.0 | 3.50e-01 | 100.0% | 16.9% |
| 3719952 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.70 | 55.0 | 4.62e-01 | 100.0% | 50.8% |
| 142988 | 243.6.1.4 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA | 0.70 | 57.0 | 4.24e-01 | 100.0% | 34.1% |
| 4946134 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.69 | 52.0 | 4.42e-01 | 100.0% | 49.2% |
| 4548121 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.65 | 48.0 | 4.03e-01 | 100.0% | 41.4% |
| 3982692 | 1001.1.1.4 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdopterin_N | 0.64 | 51.0 | 4.31e-01 | 100.0% | 70.0% |