←Back to structures
IMGVR_UViG_3300017958_000052-3300017958-Ga0181582_1000056117
Arc-VirIMGVR_UViG_3300017958_000052-3300017958-Ga0181582_1000056117
Identity
- Kingdom:
- archaea
Quality
68.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 108-153_170-224
D2
high
residues 278-288_1162-1230
D3
high
residues 295-378_1106-1156
Domain cluster:
rep: IMGVR_UViG_3300026087_000110-3300026087-Ga0208113_10042681__D68-171
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2derA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.68 | 43.0 | 5.22e-01 | 95.6% | 97.7% |
| 4paaA05 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.66 | 37.0 | 4.70e-01 | 94.1% | 93.7% |
| 3d30A02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.62 | 37.0 | 4.34e-01 | 72.6% | 85.1% |
| 1b23P03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 41.0 | 4.79e-01 | 91.9% | 96.8% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.56 | 30.0 | 3.58e-01 | 84.4% | 74.7% |
| 2e8yA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 35.0 | 3.92e-01 | 88.9% | 82.2% |
| 5iryA05 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.54 | 30.0 | 3.74e-01 | 89.6% | 88.2% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 23.0 | 3.07e-01 | 91.9% | 78.8% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 34.0 | 3.84e-01 | 88.9% | 90.6% |
| 1l3wA05 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 33.0 | 3.66e-01 | 76.3% | 82.2% |
| 2b4vA03 | 3.30.70.1970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 34.0 | 3.82e-01 | 97.0% | 90.9% |
| 3tfiA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.51 | 45.0 | 3.30e-01 | 97.8% | 82.9% |
| 3o1lB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.50 | 32.0 | 3.79e-01 | 96.3% | 97.7% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1779597 | 1.15.1.1 ↗ | beta barrels › cradle loop barrel › Baseplate wedge protein gp7 domain V › Baseplate wedge protein gp7 domain V › Gp7_5th | 0.81 | 48.0 | 5.50e-01 | 94.8% | 79.2% |
| 4614883 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.73 | 42.0 | 5.30e-01 | 91.1% | 96.2% |
| 4270212 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.73 | 43.0 | 5.25e-01 | 93.3% | 89.9% |
| 4317931 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.72 | 45.0 | 5.49e-01 | 92.6% | 98.8% |
| 4296283 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.72 | 44.0 | 5.36e-01 | 93.3% | 96.5% |
| 4497776 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.71 | 42.0 | 5.33e-01 | 91.1% | 98.8% |
| 4287778 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.71 | 43.0 | 5.14e-01 | 93.3% | 90.0% |
| 4254437 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.69 | 42.0 | 5.19e-01 | 91.9% | 96.5% |
| 3939997 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.69 | 44.0 | 5.26e-01 | 95.6% | 95.6% |
| 4229219 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.68 | 44.0 | 5.17e-01 | 95.6% | 92.6% |
| 4301091 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.68 | 42.0 | 5.06e-01 | 94.8% | 93.3% |
| 3510907 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.68 | 43.0 | 5.15e-01 | 94.8% | 96.6% |
| 3809656 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.68 | 44.0 | 5.24e-01 | 91.1% | 97.8% |
| 3504760 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.68 | 43.0 | 5.15e-01 | 95.6% | 95.6% |
| 4218835 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.67 | 44.0 | 5.15e-01 | 94.8% | 94.7% |
| 4944212 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.67 | 43.0 | 5.09e-01 | 93.3% | 97.7% |
| 3793066 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.66 | 44.0 | 5.16e-01 | 89.6% | 96.8% |
| 4097656 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.66 | 44.0 | 5.13e-01 | 89.6% | 95.8% |
| 4494894 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.66 | 46.0 | 5.19e-01 | 94.8% | 93.3% |
| 4983877 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.66 | 41.0 | 4.98e-01 | 92.6% | 95.6% |
| 4025330 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.65 | 39.0 | 4.73e-01 | 71.9% | 94.1% |
| 3171970 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.65 | 42.0 | 5.02e-01 | 91.9% | 98.9% |
| 3206575 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.64 | 41.0 | 4.47e-01 | 91.1% | 77.3% |
| 4930314 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.64 | 40.0 | 4.94e-01 | 91.9% | 100.0% |
| 3597995 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.64 | 44.0 | 4.86e-01 | 97.8% | 87.3% |
| 3597932 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.62 | 43.0 | 5.00e-01 | 91.9% | 98.9% |
| 4949489 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.61 | 38.0 | 4.58e-01 | 91.9% | 100.0% |
| 3599398 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.60 | 42.0 | 4.75e-01 | 96.3% | 96.0% |
| 3594431 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.59 | 42.0 | 4.64e-01 | 73.3% | 97.3% |
| 3618810 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.57 | 42.0 | 4.53e-01 | 97.8% | 88.1% |
| 3277196 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.57 | 35.0 | 4.18e-01 | 96.3% | 96.5% |
| 3777706 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 35.0 | 3.88e-01 | 77.0% | 82.9% |
| 3587593 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 32.0 | 4.02e-01 | 97.0% | 100.0% |
| 4946793 | 11.1.1.1392 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Metallophos | 0.54 | 33.0 | 3.45e-01 | 93.3% | 66.7% |
| 3247542 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 31.0 | 3.55e-01 | 94.8% | 76.0% |
| 3909697 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 34.0 | 3.77e-01 | 71.1% | 81.0% |
| 3269851 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 34.0 | 3.74e-01 | 96.3% | 81.9% |
| 1843094 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.53 | 34.0 | 3.78e-01 | 77.0% | 81.9% |
| 4144850 | 11.1.1.1257 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29761 | 0.53 | 34.0 | 3.91e-01 | 91.9% | 89.0% |
| 3916293 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 34.0 | 3.78e-01 | 77.8% | 83.8% |
| 3866713 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 36.0 | 3.67e-01 | 80.7% | 70.4% |
| 4316401 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 33.0 | 3.72e-01 | 71.9% | 82.9% |
| 3492680 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.52 | 43.0 | 4.61e-01 | 92.6% | 100.0% |
| 3910466 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 34.0 | 3.40e-01 | 80.0% | 65.0% |
D4
high
residues 682-902
Domain cluster:
rep: IMGVR_UViG_3300031776_000022-3300031776-Ga0308415_10004864__D80-237
D5
medium
residues 1-69
D6
medium
residues 379-474_1064-1105
Domain cluster:
rep: BML_09012016_9m_scaffold_2_prodigal-single.1__X__X__00049__D582-664
D7
medium
residues 587-652
D8
medium
residues 1294-1404
Domain cluster:
rep: NC_031927.1__YP_009322947.1__BOW86_gp014__00014__D494-591
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.68 | 46.0 | 4.63e-01 | 83.8% | 67.5% |
| 2l1tA00 | 2.30.110.70 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.68 | 43.0 | 4.34e-01 | 83.8% | 64.2% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 46.0 | 5.17e-01 | 98.2% | 94.0% |
| 3fawA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 41.0 | 4.50e-01 | 99.1% | 75.0% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.67 | 51.0 | 5.26e-01 | 98.2% | 86.7% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 45.0 | 5.12e-01 | 99.1% | 96.2% |
| 4rqyA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 39.0 | 3.85e-01 | 90.1% | 52.8% |
| 6hhuA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 41.0 | 4.65e-01 | 96.4% | 88.5% |
| 4ecnA01 | 2.60.40.3540 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 | 0.64 | 40.0 | 4.18e-01 | 84.7% | 67.0% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.64 | 47.0 | 5.10e-01 | 98.2% | 93.5% |
| 6euaA01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.64 | 45.0 | 4.16e-01 | 100.0% | 57.6% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.64 | 47.0 | 4.81e-01 | 98.2% | 81.7% |
| 1r5bA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 43.0 | 4.80e-01 | 98.2% | 87.6% |
| 5hmaA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 37.0 | 4.13e-01 | 89.2% | 74.7% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.62 | 45.0 | 4.44e-01 | 89.2% | 71.8% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.61 | 37.0 | 4.04e-01 | 83.8% | 72.5% |
| 6y43A01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.61 | 43.0 | 3.93e-01 | 100.0% | 55.1% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.61 | 47.0 | 4.56e-01 | 89.2% | 73.8% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 53.0 | 4.59e-01 | 95.5% | 98.8% |
| 1lwuC01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.59 | 44.0 | 3.97e-01 | 100.0% | 57.0% |
| 1rz1A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 52.0 | 4.63e-01 | 94.6% | 94.1% |
| 1wzlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 41.0 | 4.01e-01 | 99.1% | 65.3% |
| 3lq6A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.58 | 50.0 | 5.03e-01 | 98.2% | 93.0% |
| 2qckA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 50.0 | 4.56e-01 | 95.5% | 96.0% |
| 3cb0D00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 50.0 | 4.45e-01 | 94.6% | 92.5% |
| 4l82A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 50.0 | 4.51e-01 | 95.5% | 94.2% |
| 4f07E00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 51.0 | 4.58e-01 | 94.6% | 94.6% |
| 1yoaA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 50.0 | 4.47e-01 | 95.5% | 90.6% |
| 3bnkA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 49.0 | 4.20e-01 | 94.6% | 86.6% |
| 5choF00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 50.0 | 4.45e-01 | 94.6% | 93.8% |
| 1uscA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 50.0 | 4.28e-01 | 95.5% | 88.8% |
| 2d37A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 49.0 | 4.41e-01 | 94.6% | 93.5% |
| 2r6vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 49.0 | 4.34e-01 | 95.5% | 97.0% |
| 3pftA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 49.0 | 4.39e-01 | 95.5% | 93.6% |
| 1i0rA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 48.0 | 4.32e-01 | 95.5% | 90.7% |
| 3nfwA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 48.0 | 4.15e-01 | 94.6% | 82.7% |
| 2ecuA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 48.0 | 4.42e-01 | 95.5% | 92.6% |
| 2b9kA00 | 2.20.20.70 | Mainly Beta › Single Sheet › Anthopleurin-A › | 0.56 | 26.0 | 3.70e-01 | 79.3% | 100.0% |
| 3dclA01 | 2.102.30.10 | Mainly Beta › 3-layer Sandwich › tm1086 (SG structure) fold › tm1086 (SG structure) domain | 0.55 | 43.0 | 3.86e-01 | 98.2% | 60.1% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.55 | 44.0 | 4.28e-01 | 98.2% | 77.6% |
| 1zvcA00 | 2.40.480.10 | Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like | 0.55 | 41.0 | 3.62e-01 | 80.2% | 99.4% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.54 | 41.0 | 4.35e-01 | 95.5% | 91.0% |
| 1wk0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.68e-01 | 98.2% | 67.2% |
| 2k8qA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 4.04e-01 | 98.2% | 71.6% |
| 3rgfA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 32.0 | 3.46e-01 | 79.3% | 69.8% |
| 1vf7F01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.53 | 42.0 | 4.35e-01 | 98.2% | 97.1% |
| 2c9jA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.52 | 44.0 | 3.59e-01 | 93.7% | 70.4% |
| 4m4xA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 37.0 | 3.55e-01 | 73.0% | 97.6% |
| 2pslA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.52 | 43.0 | 3.56e-01 | 93.7% | 75.1% |
| 2as9B01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 31.0 | 3.21e-01 | 82.0% | 63.4% |
| 2wcrB00 | 3.10.129.140 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein | 0.51 | 38.0 | 3.52e-01 | 80.2% | 89.7% |
| 4f3lA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 39.0 | 3.86e-01 | 82.9% | 90.8% |
| 1uisA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.50 | 42.0 | 3.43e-01 | 94.6% | 72.3% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3729936 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.75 | 50.0 | 5.25e-01 | 82.9% | 75.0% |
| 3210962 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 54.0 | 5.83e-01 | 98.2% | 89.5% |
| 3204458 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.73 | 49.0 | 5.27e-01 | 82.9% | 78.9% |
| 3730216 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.71 | 47.0 | 5.17e-01 | 82.9% | 82.2% |
| 4016863 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.70 | 50.0 | 4.65e-01 | 82.9% | 60.7% |
| 4344991 | 1.1.5.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF | 0.69 | 49.0 | 4.61e-01 | 82.0% | 61.5% |
| 3639927 | 1.1.9.27 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF7029 | 0.69 | 50.0 | 5.04e-01 | 82.9% | 74.5% |
| 3267872 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 51.0 | 4.83e-01 | 99.1% | 65.4% |
| 3965956 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.69 | 49.0 | 5.38e-01 | 98.2% | 92.2% |
| 3970015 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.68 | 41.0 | 4.44e-01 | 82.9% | 71.3% |
| 4952909 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.67 | 47.0 | 4.89e-01 | 85.6% | 77.1% |
| 5051220 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 47.0 | 5.11e-01 | 98.2% | 90.0% |
| 4946793 | 11.1.1.1392 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Metallophos | 0.66 | 46.0 | 4.57e-01 | 100.0% | 67.5% |
| 3299946 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.66 | 56.0 | 5.55e-01 | 98.2% | 87.8% |
| 4273561 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.66 | 54.0 | 5.09e-01 | 98.2% | 73.3% |
| 1871771 | 1.1.5.43 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › MrkH_YcgR_like | 0.66 | 42.0 | 4.23e-01 | 95.5% | 64.0% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.65 | 48.0 | 4.71e-01 | 98.2% | 70.8% |
| 3688711 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.65 | 52.0 | 5.25e-01 | 98.2% | 85.5% |
| 5010878 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 51.0 | 5.10e-01 | 98.2% | 80.9% |
| 3598686 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.64 | 55.0 | 5.13e-01 | 91.0% | 85.2% |
| 3240679 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 51.0 | 4.53e-01 | 98.2% | 59.4% |
| 4441129 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.64 | 50.0 | 4.90e-01 | 98.2% | 77.5% |
| 5026244 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 46.0 | 5.02e-01 | 98.2% | 93.3% |
| 3166182 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.64 | 45.0 | 4.92e-01 | 98.2% | 91.1% |
| 4991187 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 49.0 | 5.20e-01 | 97.3% | 94.7% |
| 3968097 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 45.0 | 4.61e-01 | 90.1% | 75.5% |
| 3256764 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 56.0 | 5.38e-01 | 99.1% | 88.5% |
| 4033714 | 1.1.13.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tail | 0.63 | 44.0 | 4.69e-01 | 83.8% | 84.2% |
| 3257464 | 11.1.1.698 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 | 0.63 | 46.0 | 4.81e-01 | 100.0% | 86.0% |
| 3945543 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 41.0 | 4.58e-01 | 82.9% | 85.9% |
| 3611251 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.62 | 54.0 | 4.78e-01 | 93.7% | 85.6% |
| 5024522 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 56.0 | 4.92e-01 | 99.1% | 83.6% |
| 3552831 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.61 | 49.0 | 5.08e-01 | 98.2% | 91.4% |
| 4943623 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 50.0 | 5.28e-01 | 99.1% | 99.0% |
| 5052022 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.61 | 50.0 | 4.41e-01 | 86.5% | 75.3% |
| 3971461 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 44.0 | 4.71e-01 | 98.2% | 93.3% |
| 169881 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.61 | 53.0 | 4.38e-01 | 95.5% | 85.9% |
| 2137681 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.61 | 44.0 | 4.51e-01 | 90.1% | 78.0% |
| 3601993 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.60 | 44.0 | 3.63e-01 | 97.3% | 43.6% |
| 4342567 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.60 | 45.0 | 4.45e-01 | 91.0% | 75.7% |
| 4936008 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.60 | 45.0 | 4.84e-01 | 98.2% | 93.7% |
| 4379249 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.59 | 45.0 | 4.38e-01 | 89.2% | 72.0% |
| 3598687 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.59 | 48.0 | 4.23e-01 | 87.4% | 96.2% |
| 4978571 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.58 | 46.0 | 4.25e-01 | 84.7% | 73.1% |
| 4400928 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.58 | 43.0 | 4.15e-01 | 98.2% | 68.8% |
| 3611892 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.58 | 43.0 | 3.59e-01 | 97.3% | 45.3% |
| 4977991 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 52.0 | 4.92e-01 | 98.2% | 84.6% |
| 3688095 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 51.0 | 4.97e-01 | 98.2% | 95.8% |
| 3499820 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.58 | 49.0 | 4.66e-01 | 98.2% | 79.3% |
| 3711918 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.57 | 39.0 | 3.79e-01 | 85.6% | 61.6% |
| 4190222 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.57 | 46.0 | 3.59e-01 | 86.5% | 69.3% |
| 3997235 | 389.4.1.7 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 | 0.54 | 31.0 | 2.83e-01 | 82.9% | 40.0% |
| 4952102 | 873.1.1.22 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF25939 | 0.54 | 40.0 | 3.38e-01 | 82.0% | 45.8% |
| 4984219 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.54 | 48.0 | 3.25e-01 | 98.2% | 27.9% |
| 3859218 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.54 | 41.0 | 4.04e-01 | 81.1% | 77.5% |
| 4253790 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.54 | 43.0 | 3.41e-01 | 85.6% | 68.2% |
| 4003057 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 4.58e-01 | 96.4% | 92.6% |
| 3520873 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.54 | 42.0 | 3.89e-01 | 84.7% | 86.9% |
| 3611596 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 36.0 | 4.17e-01 | 75.7% | 96.2% |
| 160389 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.54 | 45.0 | 4.38e-01 | 91.9% | 87.0% |
| 3241831 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 4.45e-01 | 96.4% | 92.7% |
| 5046032 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.51 | 38.0 | 3.58e-01 | 79.3% | 86.4% |
| 3900933 | 11.1.1.54 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 | 0.51 | 40.0 | 3.74e-01 | 100.0% | 67.9% |
D9
medium
residues 1473-1538