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IMGVR_UViG_3300017964_000438-3300017964-Ga0181589_100064131
Arc-VirIMGVR_UViG_3300017964_000438-3300017964-Ga0181589_100064131
Identity
- Kingdom:
- archaea
Quality
75.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 108-224
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4igbB02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.72 | 52.0 | 4.86e-01 | 100.0% | 61.5% |
| 4wz9A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.66 | 45.0 | 3.69e-01 | 100.0% | 37.9% |
| 4fkeA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.66 | 44.0 | 3.54e-01 | 100.0% | 36.4% |
| 8begA03 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 50.0 | 4.62e-01 | 100.0% | 65.8% |
| 1r17A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 51.0 | 4.65e-01 | 100.0% | 65.2% |
| 4ofqA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 51.0 | 4.62e-01 | 100.0% | 66.5% |
| 1uokA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 33.0 | 3.87e-01 | 97.4% | 75.6% |
| 8begA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 54.0 | 4.87e-01 | 100.0% | 71.4% |
| 1yi9A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 40.0 | 3.81e-01 | 100.0% | 56.9% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 37.0 | 4.15e-01 | 94.9% | 81.4% |
| 8begA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 51.0 | 4.58e-01 | 100.0% | 66.3% |
| 2woyA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 50.0 | 4.49e-01 | 100.0% | 65.8% |
| 7q6gA01 | 3.30.1490.110 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.59 | 37.0 | 4.36e-01 | 100.0% | 96.1% |
| 2vrqA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 40.0 | 3.92e-01 | 100.0% | 64.4% |
| 2y2wD01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 35.0 | 3.43e-01 | 99.1% | 57.4% |
| 2p3yA03 | 2.60.40.1610 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF1254 | 0.54 | 40.0 | 3.70e-01 | 99.1% | 61.5% |
| 1wmdA02 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 41.0 | 4.16e-01 | 100.0% | 82.1% |
| 4kq7A01 | 2.60.120.1390 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 | 0.52 | 43.0 | 3.87e-01 | 100.0% | 64.8% |
| 5lf5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 4.25e-01 | 97.4% | 88.8% |
| 7k7jA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 45.0 | 3.98e-01 | 100.0% | 66.3% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.51 | 38.0 | 4.14e-01 | 100.0% | 94.9% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.51 | 46.0 | 4.52e-01 | 100.0% | 94.3% |
| 1wcdJ01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 46.0 | 3.48e-01 | 100.0% | 59.4% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3401979 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.71 | 48.0 | 3.87e-01 | 100.0% | 36.8% |
| 3313648 | 11.1.1.161 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TPPII | 0.68 | 42.0 | 4.22e-01 | 100.0% | 60.0% |
| 4992253 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.68 | 41.0 | 5.03e-01 | 99.1% | 100.0% |
| 5049693 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.67 | 46.0 | 3.55e-01 | 100.0% | 33.1% |
| 3470280 | 11.1.1.161 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TPPII | 0.65 | 44.0 | 4.30e-01 | 100.0% | 64.0% |
| 4282202 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.65 | 42.0 | 4.23e-01 | 100.0% | 64.2% |
| 3602023 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.64 | 42.0 | 4.37e-01 | 100.0% | 70.9% |
| 154146 | 11.1.5.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Cohesin | 0.62 | 45.0 | 4.09e-01 | 100.0% | 56.4% |
| 3183322 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.61 | 42.0 | 3.40e-01 | 100.0% | 36.4% |
| 3269110 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.60 | 45.0 | 4.62e-01 | 100.0% | 82.7% |
| 2420855 | 1.1.7.42 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PcRGLX_1st | 0.59 | 42.0 | 4.54e-01 | 97.4% | 86.7% |
| 3972567 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.59 | 41.0 | 4.61e-01 | 100.0% | 93.3% |
| 4030741 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.59 | 46.0 | 4.07e-01 | 100.0% | 57.1% |
| 3786655 | 12.1.1.44 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_5_C | 0.58 | 43.0 | 4.28e-01 | 100.0% | 74.2% |
| 4026938 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.57 | 43.0 | 4.25e-01 | 100.0% | 73.6% |
| 3591018 | 11.1.5.45 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › GramPos_pilinBB | 0.57 | 51.0 | 4.45e-01 | 100.0% | 65.9% |
| 3507189 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 41.0 | 4.34e-01 | 98.3% | 87.0% |
| 2514619 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.55 | 41.0 | 3.29e-01 | 99.1% | 38.3% |
| 3510329 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.55 | 38.0 | 3.88e-01 | 100.0% | 71.3% |
| 3236810 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 49.0 | 4.40e-01 | 100.0% | 75.9% |
| 3941209 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 47.0 | 4.61e-01 | 100.0% | 87.2% |
| 3409825 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 45.0 | 4.53e-01 | 100.0% | 88.3% |
| 4954924 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.55 | 40.0 | 3.75e-01 | 100.0% | 60.7% |
| 3215147 | 10.32.1.5 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Ephrin_lbd | 0.55 | 47.0 | 4.11e-01 | 100.0% | 62.2% |
| 4167365 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.55 | 40.0 | 4.36e-01 | 100.0% | 94.7% |
| 3245882 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.52 | 40.0 | 3.99e-01 | 97.4% | 79.2% |
| 5050281 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.51 | 26.0 | 3.07e-01 | 100.0% | 70.0% |
| 1164 | 10.32.1.19 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PPC | 0.51 | 39.0 | 3.96e-01 | 100.0% | 82.8% |
| 3921542 | 10.32.1.69 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › LAMININ_IV_B | 0.51 | 40.0 | 3.36e-01 | 100.0% | 49.0% |
| 4557440 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.51 | 41.0 | 4.30e-01 | 100.0% | 96.2% |
| 4980801 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 42.0 | 4.40e-01 | 100.0% | 98.1% |
| 3472541 | 10.32.1.184 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Androglobin_II | 0.50 | 39.0 | 4.23e-01 | 99.1% | 99.0% |
D2
high
residues 413-456_1053-1106
Domain cluster:
rep: BML_09012016_9m_scaffold_2_prodigal-single.1__X__X__00049__D582-664
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fo8D02 | 2.40.10.380 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.79 | 65.0 | 6.79e-01 | 86.7% | 100.0% |
| 2nq3A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.61 | 53.0 | 4.89e-01 | 98.0% | 99.2% |
| 4oq8A00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.59 | 47.0 | 4.21e-01 | 96.9% | 60.4% |
| 2dpyA00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 40.0 | 2.67e-01 | 71.4% | 23.0% |
| 4yhbA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 40.0 | 3.72e-01 | 71.4% | 80.6% |
| 3q39B02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.58 | 40.0 | 3.87e-01 | 70.4% | 91.8% |
| 7uzsX04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 47.0 | 4.74e-01 | 96.9% | 92.7% |
| 3dkzA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 35.0 | 3.26e-01 | 94.9% | 47.2% |
| 4agrB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 45.0 | 4.02e-01 | 89.8% | 94.4% |
| 2wkkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 44.0 | 3.90e-01 | 87.8% | 84.7% |
| 6grsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 4.37e-01 | 93.9% | 89.5% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 47.0 | 3.70e-01 | 100.0% | 49.8% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 4.25e-01 | 96.9% | 88.9% |
| 1hlcA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 40.0 | 3.68e-01 | 77.6% | 89.9% |
| 4ybvA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 35.0 | 3.32e-01 | 94.9% | 53.7% |
| 7wqxA01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.54 | 39.0 | 3.85e-01 | 90.8% | 71.7% |
| 3pijA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.53 | 40.0 | 3.59e-01 | 81.6% | 84.6% |
| 5gm0A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 40.0 | 3.72e-01 | 81.6% | 91.5% |
| 3hbzA02 | 2.60.120.890 | Mainly Beta › Sandwich › Jelly Rolls › BT2081, beta-jelly-roll domain | 0.53 | 43.0 | 3.34e-01 | 92.9% | 54.7% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 3.43e-01 | 100.0% | 48.5% |
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 45.0 | 3.58e-01 | 100.0% | 55.5% |
| 2wjsA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 3.49e-01 | 91.8% | 79.8% |
| 4b9gA00 | 2.60.40.3480 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 3.84e-01 | 95.9% | 91.1% |
| 1edqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 4.22e-01 | 94.9% | 86.9% |
| 1yewA01 | 2.60.120.570 | Mainly Beta › Sandwich › Jelly Rolls › Particulate methane monooxygenase, b subunit. Chain: A, domain 1 | 0.50 | 42.0 | 3.73e-01 | 94.9% | 68.5% |
| 2wsuA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 40.0 | 3.67e-01 | 90.8% | 90.6% |
| 2dyiA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.50 | 33.0 | 3.55e-01 | 73.5% | 79.8% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2095488 | 3629.1.1.0 ↗ | beta sandwiches › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain › Tail sheath protein beta-sandwich domain | 0.79 | 62.0 | 6.53e-01 | 82.7% | 97.8% |
| 358963 | 10.19.1.1 ↗ | beta sandwiches › jelly-roll › Domain I of tail sheath protein Gp18 › Domain I of tail sheath protein Gp18 › Gp18_dom_I | 0.77 | 65.0 | 6.37e-01 | 88.8% | 87.7% |
| 5044901 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.64 | 49.0 | 4.68e-01 | 99.0% | 71.3% |
| 4403870 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.63 | 42.0 | 4.27e-01 | 70.4% | 70.5% |
| 4072524 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.61 | 42.0 | 4.12e-01 | 72.4% | 76.4% |
| 4956010 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 46.0 | 4.73e-01 | 96.9% | 92.2% |
| 3196339 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 39.0 | 3.64e-01 | 70.4% | 69.2% |
| 5014244 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.57 | 37.0 | 3.81e-01 | 77.6% | 69.1% |
| 5069218 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.57 | 40.0 | 3.90e-01 | 99.0% | 66.4% |
| 4880698 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.56 | 39.0 | 4.36e-01 | 83.7% | 100.0% |
| 2082639 | 5095.1.1.0 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen | 0.56 | 40.0 | 3.30e-01 | 91.8% | 38.8% |
| 3863875 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 42.0 | 4.29e-01 | 98.0% | 83.2% |
| 4874174 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.55 | 46.0 | 3.66e-01 | 96.9% | 53.5% |
| 3934798 | 11.1.4.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 | 0.55 | 45.0 | 4.35e-01 | 92.9% | 82.6% |
| 3933402 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.55 | 41.0 | 3.93e-01 | 94.9% | 69.6% |
| 3750220 | 11.1.1.841 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL27RA_FN3_3 | 0.54 | 41.0 | 4.08e-01 | 92.9% | 79.0% |
| 4872941 | 10.2.1.43 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat_C | 0.54 | 36.0 | 3.48e-01 | 70.4% | 84.0% |
| 3736741 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.53 | 35.0 | 3.72e-01 | 96.9% | 80.0% |
| 3927636 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.53 | 42.0 | 3.46e-01 | 89.8% | 70.2% |
| 5009476 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 38.0 | 3.97e-01 | 76.5% | 100.0% |
| 3420152 | 11.1.1.235 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3_6 | 0.52 | 43.0 | 4.20e-01 | 93.9% | 88.2% |
| 5038729 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 4.05e-01 | 92.9% | 82.9% |
| 3912828 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.51 | 37.0 | 3.64e-01 | 94.9% | 72.4% |
| 3917548 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.51 | 40.0 | 3.37e-01 | 88.8% | 73.2% |
D3
high
residues 461-504_970-1050
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4n0rA03 | 2.60.40.3950 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 44.0 | 4.69e-01 | 100.0% | 80.9% |
| 5xctB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 44.0 | 4.59e-01 | 100.0% | 83.0% |
| 3fkuS02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 42.0 | 4.50e-01 | 99.2% | 88.3% |
| 4igbB02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 39.0 | 3.79e-01 | 100.0% | 61.5% |
| 5eh1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 34.0 | 3.76e-01 | 97.6% | 76.8% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.56 | 24.0 | 3.61e-01 | 74.4% | 100.0% |
| 3sknA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 39.0 | 4.21e-01 | 99.2% | 85.8% |
| 2m2dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 4.19e-01 | 100.0% | 80.5% |
| 4ye4L01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 4.35e-01 | 100.0% | 87.6% |
| 3omzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 39.0 | 4.27e-01 | 97.6% | 91.2% |
| 1r0aH01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 4.30e-01 | 100.0% | 83.7% |
| 5b6iA02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.54 | 41.0 | 4.40e-01 | 99.2% | 94.4% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.54 | 38.0 | 4.29e-01 | 95.2% | 97.9% |
| 1g0dA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 4.36e-01 | 100.0% | 81.0% |
| 6on6A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 38.0 | 4.09e-01 | 99.2% | 86.1% |
| 2y23A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 32.0 | 3.49e-01 | 97.6% | 70.2% |
| 3qqnA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.86e-01 | 100.0% | 77.6% |
| 4ofyD01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 36.0 | 3.94e-01 | 99.2% | 86.4% |
| 1g1kA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 35.0 | 3.41e-01 | 100.0% | 59.4% |
| 4gjtC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 4.17e-01 | 100.0% | 90.2% |
| 1vx7X00 | 3.30.1360.210 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.52 | 30.0 | 3.39e-01 | 87.2% | 72.2% |
| 4ksnA00 | 6.20.250.80 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.52 | 28.0 | 3.55e-01 | 80.0% | 96.9% |
| 1y7eA02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.50 | 43.0 | 4.48e-01 | 98.4% | 100.0% |
| 5tfmA01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.50 | 32.0 | 3.58e-01 | 99.2% | 82.7% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3843023 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.60 | 43.0 | 4.83e-01 | 100.0% | 97.9% |
| 4963984 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.59 | 26.0 | 3.14e-01 | 99.2% | 60.0% |
| 2444026 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.59 | 42.0 | 4.50e-01 | 99.2% | 85.2% |
| 3528111 | 10.21.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 | 0.59 | 38.0 | 3.84e-01 | 100.0% | 64.0% |
| 2582567 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 41.0 | 4.47e-01 | 100.0% | 88.5% |
| 2172939 | 11.1.1.1159 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GP120 | 0.58 | 40.0 | 4.44e-01 | 100.0% | 89.9% |
| 4120009 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.56 | 38.0 | 4.12e-01 | 100.0% | 83.8% |
| 3772640 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.55 | 37.0 | 3.79e-01 | 100.0% | 68.8% |
| 4882955 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.55 | 40.0 | 4.20e-01 | 100.0% | 85.0% |
| 3486476 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 39.0 | 4.18e-01 | 100.0% | 85.5% |
| 3283109 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.54 | 41.0 | 4.28e-01 | 97.6% | 90.0% |
| 3488301 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 39.0 | 4.15e-01 | 100.0% | 86.4% |
| 3604044 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.54 | 39.0 | 4.33e-01 | 96.0% | 96.9% |
| 1436 | 11.1.1.16 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_N | 0.54 | 45.0 | 4.39e-01 | 100.0% | 82.2% |
| 3518079 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 37.0 | 4.05e-01 | 96.0% | 90.0% |
| 3798658 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.53 | 37.0 | 4.01e-01 | 99.2% | 86.7% |
| 3911511 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.51 | 40.0 | 4.34e-01 | 100.0% | 97.1% |
| 5059262 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 36.0 | 3.82e-01 | 99.2% | 82.7% |
| 3490350 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.50 | 23.0 | 3.10e-01 | 77.6% | 81.5% |
D4
high
residues 509-678_913-962
D5
medium
residues 7-94_239-273
D6
medium
residues 298-411
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.70 | 49.0 | 5.50e-01 | 98.2% | 95.3% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.65 | 42.0 | 3.03e-01 | 95.6% | 22.0% |
| 4jcwA02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.63 | 38.0 | 4.21e-01 | 93.9% | 75.6% |
| 3tfiA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.61 | 41.0 | 2.89e-01 | 95.6% | 21.1% |
| 3d30A02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.60 | 39.0 | 4.21e-01 | 94.7% | 77.7% |
| 2hczX02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.57 | 38.0 | 3.97e-01 | 93.9% | 74.0% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 37.0 | 3.94e-01 | 71.9% | 86.5% |
| 2b4vA03 | 3.30.70.1970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 36.0 | 3.83e-01 | 70.2% | 82.8% |
| 3nfwA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 40.0 | 3.48e-01 | 82.5% | 65.4% |
| 2r0xA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 40.0 | 3.65e-01 | 82.5% | 76.3% |
| 1i0rA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 40.0 | 3.61e-01 | 82.5% | 75.8% |
| 3pftA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 40.0 | 3.61e-01 | 82.5% | 75.0% |
| 1rz1A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 40.0 | 3.64e-01 | 82.5% | 75.7% |
| 1uscA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 40.0 | 3.43e-01 | 82.5% | 66.9% |
| 4f07E00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 39.0 | 3.63e-01 | 82.5% | 76.5% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4494894 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.75 | 52.0 | 5.41e-01 | 71.1% | 95.2% |
| 3939997 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.71 | 49.0 | 5.43e-01 | 70.2% | 92.2% |
| 4229219 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.71 | 49.0 | 5.31e-01 | 71.1% | 95.8% |
| 3793066 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.71 | 49.0 | 5.37e-01 | 71.1% | 94.6% |
| 3473671 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.70 | 48.0 | 4.94e-01 | 70.2% | 81.8% |
| 4097656 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.70 | 49.0 | 5.34e-01 | 71.9% | 94.7% |
| 3219717 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.69 | 47.0 | 5.27e-01 | 70.2% | 97.8% |
| 3597995 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.69 | 47.0 | 4.86e-01 | 70.2% | 79.1% |
| 3809656 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.69 | 49.0 | 5.48e-01 | 73.7% | 97.8% |
| 4218835 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.69 | 48.0 | 5.22e-01 | 71.9% | 94.7% |
| 3504760 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.69 | 48.0 | 5.31e-01 | 71.9% | 95.6% |
| 4301091 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.68 | 48.0 | 5.28e-01 | 71.9% | 94.4% |
| 3744357 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.68 | 46.0 | 5.26e-01 | 70.2% | 98.8% |
| 4328639 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.66 | 51.0 | 5.55e-01 | 100.0% | 98.9% |
| 3594431 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.56 | 48.0 | 4.95e-01 | 93.0% | 96.4% |
| 3269851 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 37.0 | 3.81e-01 | 70.2% | 77.1% |
| 4946793 | 11.1.1.1392 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Metallophos | 0.53 | 36.0 | 3.58e-01 | 70.2% | 65.8% |
| 1843094 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.52 | 37.0 | 3.84e-01 | 98.2% | 79.0% |
| 4551218 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.51 | 39.0 | 3.50e-01 | 82.5% | 70.3% |
| 3618810 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.51 | 47.0 | 4.64e-01 | 100.0% | 96.6% |
| 3916293 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 37.0 | 3.83e-01 | 89.5% | 82.9% |
D7
medium
residues 739-901
Domain cluster:
rep: IMGVR_UViG_3300031776_000022-3300031776-Ga0308415_10004864__D80-237