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IMGVR_UViG_3300017971_001682-3300017971-Ga0180438_100397231
Arc-VirIMGVR_UViG_3300017971_001682-3300017971-Ga0180438_100397231
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-64
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04586.23 best | Peptidase_S78 | 22.2 | 2.00e-04 | 58.6% | 18.8% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.84 | 59.0 | 4.20e-01 | 84.5% | 29.0% |
| 2c42A01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.57 | 38.0 | 2.54e-01 | 70.7% | 15.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3411772 | 5.1.4.278 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, BING4CT | 0.80 | 62.0 | 3.60e-01 | 82.8% | 10.6% |
| 4392278 | 604.12.1.9 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 | 0.72 | 66.0 | 4.77e-01 | 100.0% | 96.1% |
| 3449623 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.71 | 55.0 | 3.00e-01 | 81.0% | 13.6% |
| 3607147 | 2004.1.1.210 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ERCC3_RAD25_C | 0.69 | 50.0 | 3.18e-01 | 75.9% | 22.7% |
| 4645961 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.68 | 63.0 | 4.25e-01 | 100.0% | 30.0% |
| 3382208 | 108.1.1.28 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 | 0.56 | 40.0 | 3.12e-01 | 77.6% | 36.8% |
| 3338330 | 109.4.1.1260 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long | 0.53 | 41.0 | 2.57e-01 | 96.6% | 55.3% |
| 3608984 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 42.0 | 2.38e-01 | 100.0% | 40.7% |