Back to structures

IMGVR_UViG_3300017971_004807-3300017971-Ga0180438_100159083

Arc-Vir

IMGVR_UViG_3300017971_004807-3300017971-Ga0180438_100159083

Quality

73.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-66
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ib0A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.75 61.0 4.53e-01 90.6% 76.3%
4zxwB01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.71 48.0 3.39e-01 84.9% 22.1%
1br2A04 1.20.58.530 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 58.0 4.08e-01 92.5% 64.7%
2lioA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.64 45.0 3.37e-01 75.5% 100.0%
3daxB00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.62 48.0 2.82e-01 86.8% 39.1%
2eklA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 46.0 3.16e-01 96.2% 100.0%
5u89A02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.52 43.0 3.09e-01 94.3% 48.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3581772 4177.1.1.8 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 0.79 61.0 3.80e-01 83.0% 63.6%
3608999 192.13.1.1 alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like › Isy1 0.77 63.0 5.11e-01 90.6% 54.0%
3734862 109.4.1.198 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.71 62.0 3.54e-01 98.1% 10.8%
3345404 10.12.1.16 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy 0.62 46.0 3.51e-01 83.0% 35.0%