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IMGVR_UViG_3300017971_006870-3300017971-Ga0180438_1001859714

Arc-Vir

IMGVR_UViG_3300017971_006870-3300017971-Ga0180438_1001859714

Quality

82.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-112
PDB
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 40.0 3.23e-01 77.7% 59.6%
3hutA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 38.0 3.48e-01 80.4% 65.3%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1273610 286.1.1.4 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase 0.53 35.0 3.23e-01 92.0% 51.7%
3838657 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.52 40.0 3.70e-01 83.9% 67.5%
3692244 5.1.4.436 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, PQQ_2, Beta-prop_EMC1_N 0.52 44.0 2.62e-01 92.9% 36.1%
4279233 4126.1.1.6 a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › DabA 0.51 40.0 3.04e-01 83.9% 89.6%
4032931 286.1.1.5 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › CntK_N 0.51 42.0 4.06e-01 91.1% 100.0%
3271417 219.1.1.23 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB 0.50 39.0 3.05e-01 83.9% 72.0%
D2 medium residues 133-206
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lkbA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 48.0 3.70e-01 85.1% 75.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4117456 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.61 49.0 3.91e-01 86.5% 79.3%
4962756 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.60 47.0 3.83e-01 85.1% 77.9%