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IMGVR_UViG_3300017986_003874-3300017986-Ga0181569_100107239

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300017986_003874-3300017986-Ga0181569_100107239 ↗
Kingdom:: archaea

Quality

88.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 49-106

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2aj6A00	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.63	45.0	3.62e-01	81.0%	37.5%
2fulB00	1.25.40.180	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.61	41.0	2.98e-01	70.7%	30.2%
2ebmA00	3.10.110.10	Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme	0.58	46.0	3.64e-01	89.7%	75.8%
6lo8F01	1.10.287.810	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains	0.58	41.0	3.95e-01	77.6%	75.4%
4ex8A00	3.40.1790.10	Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain	0.57	49.0	3.14e-01	100.0%	29.9%
2va8A03	1.10.3380.30	Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold ›	0.56	44.0	3.03e-01	87.9%	31.5%
2kdoA02	1.10.10.900	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › SBDS protein C-terminal domain, subdomain 1	0.56	47.0	4.37e-01	100.0%	75.3%
1kblA05	1.20.80.30	Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein ›	0.56	47.0	4.14e-01	98.3%	98.9%
3t0yA01	1.10.1740.10	Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif	0.56	41.0	3.98e-01	87.9%	72.7%
3pm6A00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.53	44.0	2.90e-01	100.0%	91.3%
2pg0A03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.51	41.0	3.22e-01	98.3%	75.2%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4430764	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.75	56.0	4.88e-01	79.3%	58.8%
3286905	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.73	60.0	5.06e-01	89.7%	87.4%
3293941	2006.1.4.4 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N	0.73	56.0	3.80e-01	82.8%	54.3%
3923243	864.1.1.3 ↗	a+b two layers › DLC › DLC › DLC › Ground-like	0.68	50.0	4.34e-01	79.3%	90.0%
3804346	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.65	53.0	5.00e-01	98.3%	75.7%
3457711	3846.1.1.0 ↗	alpha bundles › IcmR › IcmR › IcmR	0.59	43.0	4.40e-01	79.3%	89.1%
3629263	210.1.1.1 ↗	a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome	0.57	50.0	3.48e-01	100.0%	81.5%
5022010	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.55	47.0	3.91e-01	100.0%	60.0%
3632767	109.34.1.2 ↗	alpha superhelices › Repetitive alpha hairpins › 26S proteasome subunit Rpn2 N-terminal domain › 26S proteasome subunit Rpn2 N-terminal domain › RPN2_N	0.54	37.0	2.32e-01	72.4%	18.1%
3441669	3846.1.1.0 ↗	alpha bundles › IcmR › IcmR › IcmR	0.53	37.0	3.96e-01	77.6%	97.8%
3909150	5063.1.1.15 ↗	alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › OCIA	0.52	44.0	4.09e-01	98.3%	86.7%
3448849	605.8.1.5 ↗	alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › Med26	0.50	33.0	3.27e-01	74.1%	61.5%
3776754	5055.1.1.0 ↗	extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel	0.50	36.0	3.49e-01	79.3%	67.7%