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IMGVR_UViG_3300017989_000330-3300017989-Ga0180432_1000214629
Arc-VirIMGVR_UViG_3300017989_000330-3300017989-Ga0180432_1000214629
Identity
- Kingdom:
- archaea
Quality
89.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-54
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3f75P00 | 1.10.287.2250 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.85 | 71.0 | 6.31e-01 | 94.4% | 65.3% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.79 | 56.0 | 4.34e-01 | 74.1% | 43.6% |
| 4lunU00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.76 | 53.0 | 3.24e-01 | 74.1% | 16.1% |
| 1xl3C00 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.72 | 58.0 | 4.77e-01 | 85.2% | 50.5% |
| 1vzsA01 | 1.10.246.110 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Mitochondrial ATP synthase-coupling factor 6 | 0.70 | 58.0 | 5.55e-01 | 96.3% | 81.0% |
| 4ex8A00 | 3.40.1790.10 | Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain | 0.69 | 60.0 | 3.77e-01 | 100.0% | 97.0% |
| 3kfwX03 | 1.20.58.1460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 50.0 | 4.43e-01 | 77.8% | 86.8% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 49.0 | 3.99e-01 | 83.3% | 49.0% |
| 5xnsC00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.64 | 42.0 | 3.90e-01 | 85.2% | 52.9% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.64 | 53.0 | 4.59e-01 | 92.6% | 79.8% |
| 1hlvA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 45.0 | 4.39e-01 | 85.2% | 68.3% |
| 3qxzA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.62 | 44.0 | 4.29e-01 | 75.9% | 68.3% |
| 2v40A02 | 1.10.300.10 | Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 | 0.62 | 44.0 | 3.72e-01 | 74.1% | 67.0% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 51.0 | 4.57e-01 | 92.6% | 100.0% |
| 7y11B01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.60 | 47.0 | 4.53e-01 | 87.0% | 73.0% |
| 2jt1A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 41.0 | 3.73e-01 | 81.5% | 53.5% |
| 3cmnA01 | 1.20.150.30 | Mainly Alpha › Up-down Bundle › Lysin › Zincin-like metallopeptidase, N-terminal domain | 0.60 | 46.0 | 3.69e-01 | 88.9% | 41.0% |
| 2yfqB01 | 1.10.8.1210 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 38.0 | 3.95e-01 | 74.1% | 73.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3509928 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.93 | 80.0 | 4.61e-01 | 92.6% | 12.1% |
| 3670045 | 3998.1.1.0 ↗ | alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 | 0.86 | 69.0 | 4.57e-01 | 88.9% | 22.9% |
| 3933741 | 3998.1.1.1 ↗ | alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 | 0.84 | 69.0 | 6.28e-01 | 88.9% | 68.6% |
| 3401765 | 3998.1.1.1 ↗ | alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 | 0.79 | 63.0 | 5.80e-01 | 87.0% | 68.6% |
| 3343280 | 603.1.1.157 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF28884 | 0.72 | 57.0 | 5.24e-01 | 87.0% | 65.7% |
| 3503293 | 109.4.1.470 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS2 | 0.71 | 64.0 | 3.97e-01 | 100.0% | 76.1% |
| 3274209 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.66 | 58.0 | 4.15e-01 | 100.0% | 32.7% |
| 4959086 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.66 | 48.0 | 4.31e-01 | 77.8% | 60.0% |
| 3404881 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.66 | 56.0 | 4.08e-01 | 92.6% | 35.7% |
| 3270778 | 108.1.1.96 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 | 0.59 | 51.0 | 4.24e-01 | 100.0% | 61.0% |
| 3700089 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.59 | 55.0 | 5.17e-01 | 100.0% | 83.1% |