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IMGVR_UViG_3300017991_000003-3300017991-Ga0180434_10000034186

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300017991_000003-3300017991-Ga0180434_10000034186 ↗
Kingdom:: archaea

Quality

46.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-89

PDB

Domain cluster: rep: rifoxya1_full_scaffold_1_prodigal-single.1__X__X__00286__D84-134

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF18905.6 best	DUF5661	50.1	4.00e-13	70.6%	73.9%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3dddA01	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.65	46.0	3.75e-01	75.0%	85.4%
1xrhD01	1.10.1530.10	Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel	0.64	48.0	4.19e-01	80.9%	96.1%
3pvuA01	1.10.287.1270	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.62	49.0	4.19e-01	85.3%	74.8%
8ctsB01	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.60	43.0	4.04e-01	79.4%	60.9%
4nn1A00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.59	49.0	3.51e-01	92.6%	52.2%
1f45B00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.59	44.0	3.55e-01	85.3%	40.6%
3ifuA02	3.90.70.60	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Porcine arterivirus-type cysteine proteinase alpha domain	0.57	41.0	3.46e-01	76.5%	84.5%
3khyA01	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.54	41.0	2.99e-01	82.4%	53.4%
1lwdA00	3.40.718.10	Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase	0.51	39.0	2.53e-01	88.2%	41.4%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3244718	103.4.1.0 ↗	alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein	0.68	43.0	4.01e-01	80.9%	51.8%
3219902	1128.1.1.2 ↗	alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2	0.66	55.0	5.19e-01	91.2%	98.8%
3915549	1128.1.1.1 ↗	alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR	0.65	56.0	5.31e-01	94.1%	100.0%
5025466	103.4.1.0 ↗	alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein	0.64	45.0	4.53e-01	75.0%	94.3%
3589121	5076.2.1.2 ↗	alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF975	0.64	43.0	3.02e-01	70.6%	40.9%
3948028	7014.1.1.2 ↗	alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE	0.61	40.0	3.35e-01	80.9%	37.5%
3795180	5050.1.1.0 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter	0.60	45.0	3.05e-01	80.9%	22.7%
4018155	102.1.1.0 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like	0.55	38.0	3.62e-01	75.0%	71.8%
4955414	2004.1.1.343 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14	0.52	38.0	2.87e-01	83.8%	63.5%
1693526	2008.1.1.70 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_BsaWI	0.50	43.0	2.94e-01	100.0%	36.4%