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IMGVR_UViG_3300017991_000003-3300017991-Ga0180434_100000344
Arc-VirIMGVR_UViG_3300017991_000003-3300017991-Ga0180434_100000344
Identity
- Kingdom:
- archaea
Quality
61.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-128
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g1tA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 32.0 | 4.31e-01 | 82.2% | 85.2% |
| 2fji101 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.54 | 41.0 | 3.39e-01 | 79.7% | 81.3% |
| 2kd1A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.51 | 39.0 | 3.96e-01 | 81.4% | 94.9% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.50 | 40.0 | 4.07e-01 | 88.1% | 85.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3909630 | 601.48.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › vWA2 C-terminal domain › vWA2 C-terminal domain | 0.72 | 32.0 | 3.93e-01 | 72.9% | 64.0% |
| 5038830 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.66 | 35.0 | 3.83e-01 | 76.3% | 61.0% |
| 2501268 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.63 | 36.0 | 3.59e-01 | 81.4% | 54.2% |
| 3410458 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.62 | 33.0 | 3.44e-01 | 76.3% | 54.0% |
| 3484776 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 33.0 | 3.32e-01 | 79.7% | 56.7% |
| 3818924 | 109.4.1.1475 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27629 | 0.56 | 41.0 | 3.23e-01 | 76.3% | 51.2% |
| 4431924 | 6058.1.1.1 ↗ | alpha arrays › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › DAO_C | 0.54 | 43.0 | 4.14e-01 | 89.8% | 74.1% |
| 3739054 | 109.4.1.2298 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26140 | 0.53 | 44.0 | 3.73e-01 | 89.8% | 77.0% |
| 4026999 | 150.1.2.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › Ribonuc_red_sm | 0.53 | 45.0 | 3.37e-01 | 94.9% | 68.4% |
| 4644531 | 1037.1.1.1 ↗ | alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT | 0.51 | 38.0 | 2.91e-01 | 79.7% | 90.2% |
| 3605064 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.50 | 36.0 | 2.45e-01 | 89.8% | 18.1% |
| 2754206 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.50 | 36.0 | 3.80e-01 | 84.7% | 85.4% |
D2
high
residues 138-185
D3
high
residues 194-276
D4
high
residues 295-341