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IMGVR_UViG_3300018002_000020-3300018002-Ga0187868_10021253
Arc-VirIMGVR_UViG_3300018002_000020-3300018002-Ga0187868_10021253
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-234
Domain cluster:
rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
Pfam (4)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07724.21 best | AAA_2 | 111.6 | 5.60e-32 | 81.6% | 99.4% |
| PF00158.33 | Sigma54_activat | 24.9 | 2.00e-05 | 77.1% | 72.6% |
| PF07728.21 | AAA_5 | 31.6 | 2.20e-07 | 62.3% | 89.9% |
| PF00004.36 | AAA | 30.5 | 6.40e-07 | 61.0% | 83.2% |
D2
high
residues 240-332
Domain cluster:
rep: IMGVR_UViG_3300035698_023746-3300035698-Ga0374944_608699_9864_12323__D728-818
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10431.16 best | ClpB_D2-small | 56.8 | 2.60e-15 | 88.2% | 95.1% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r6bX05 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.86 | 80.0 | 7.85e-01 | 100.0% | 92.9% |
| 4ciuA04 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.86 | 80.0 | 8.02e-01 | 100.0% | 98.9% |
| 5d4wA04 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.85 | 79.0 | 7.92e-01 | 100.0% | 98.9% |
| 1um8A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.76 | 70.0 | 6.92e-01 | 100.0% | 95.9% |
| 5hweA01 | 3.30.1330.170 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A | 0.64 | 40.0 | 3.80e-01 | 77.4% | 54.2% |
| 1y8oA02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.59 | 52.0 | 4.33e-01 | 100.0% | 58.2% |
| 1m8pA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 42.0 | 3.42e-01 | 77.4% | 92.4% |
| 1dhrA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 49.0 | 3.64e-01 | 94.6% | 94.5% |
| 1rliD00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.54 | 33.0 | 2.71e-01 | 100.0% | 33.3% |
| 3zdbA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.54 | 37.0 | 3.19e-01 | 73.1% | 93.0% |
| 3jb9X01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 37.0 | 2.81e-01 | 72.0% | 82.5% |
| 3o8oF01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 45.0 | 3.47e-01 | 98.9% | 88.9% |
| 1f2dA01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 38.0 | 2.96e-01 | 79.6% | 83.6% |
| 8bkdA01 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.51 | 40.0 | 3.10e-01 | 87.1% | 89.1% |
ECOD (83)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2754894 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.91 | 82.0 | 7.39e-01 | 97.8% | 72.7% |
| 3004432 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.91 | 86.0 | 8.38e-01 | 100.0% | 92.9% |
| 4029162 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.91 | 84.0 | 8.37e-01 | 100.0% | 95.8% |
| 4419950 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.91 | 83.0 | 7.78e-01 | 100.0% | 81.8% |
| 4403270 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.90 | 82.0 | 8.25e-01 | 100.0% | 95.7% |
| 3010735 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.90 | 78.0 | 7.56e-01 | 94.6% | 83.3% |
| 3815913 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.90 | 83.0 | 8.27e-01 | 100.0% | 95.8% |
| 3326552 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.90 | 83.0 | 8.09e-01 | 100.0% | 91.0% |
| 4825678 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.90 | 75.0 | 5.96e-01 | 91.4% | 47.4% |
| 4044739 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.89 | 83.0 | 7.97e-01 | 98.9% | 87.6% |
| 4571266 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.89 | 82.0 | 8.22e-01 | 100.0% | 95.8% |
| 3987312 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.89 | 81.0 | 8.24e-01 | 100.0% | 98.9% |
| 3493325 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.89 | 84.0 | 7.37e-01 | 100.0% | 88.5% |
| 3983704 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.89 | 82.0 | 7.92e-01 | 98.9% | 88.3% |
| 3969278 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.89 | 82.0 | 8.14e-01 | 100.0% | 95.8% |
| 4154381 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.89 | 80.0 | 8.20e-01 | 100.0% | 100.0% |
| 4024430 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.89 | 81.0 | 8.08e-01 | 96.8% | 98.9% |
| 4081190 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.89 | 84.0 | 7.34e-01 | 100.0% | 72.3% |
| 4015704 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.88 | 83.0 | 8.36e-01 | 100.0% | 98.9% |
| 4031233 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.88 | 80.0 | 8.14e-01 | 100.0% | 98.9% |
| 3594854 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.88 | 83.0 | 8.29e-01 | 100.0% | 97.9% |
| 3387640 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.88 | 80.0 | 8.16e-01 | 98.9% | 100.0% |
| 3839924 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.88 | 80.0 | 7.94e-01 | 100.0% | 94.7% |
| 3270907 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.88 | 80.0 | 8.12e-01 | 100.0% | 100.0% |
| 3588671 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.88 | 80.0 | 8.01e-01 | 100.0% | 95.8% |
| 4493849 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.88 | 79.0 | 8.05e-01 | 98.9% | 100.0% |
| 3669409 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.88 | 82.0 | 7.96e-01 | 98.9% | 100.0% |
| 4089761 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.88 | 79.0 | 8.06e-01 | 100.0% | 100.0% |
| 4028080 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.87 | 81.0 | 8.09e-01 | 98.9% | 98.9% |
| 4363328 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.87 | 80.0 | 8.01e-01 | 100.0% | 95.8% |
| 3206826 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.87 | 66.0 | 6.44e-01 | 78.5% | 94.0% |
| 3703884 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.87 | 80.0 | 8.02e-01 | 100.0% | 96.8% |
| 4023701 | 148.1.3.261 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small, AAA_lid_9 | 0.87 | 81.0 | 5.49e-01 | 100.0% | 31.0% |
| 3360121 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.87 | 81.0 | 7.90e-01 | 100.0% | 93.0% |
| 1309645 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.86 | 80.0 | 6.98e-01 | 100.0% | 69.2% |
| 3961087 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.86 | 81.0 | 7.74e-01 | 100.0% | 96.2% |
| 2979521 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.86 | 80.0 | 7.81e-01 | 98.9% | 100.0% |
| 4197048 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.86 | 79.0 | 7.69e-01 | 100.0% | 91.0% |
| 3967645 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.86 | 81.0 | 8.06e-01 | 100.0% | 97.9% |
| 4391280 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.86 | 80.0 | 7.97e-01 | 100.0% | 96.8% |
| 3388255 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.86 | 77.0 | 7.89e-01 | 100.0% | 100.0% |
| 3634711 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.86 | 80.0 | 6.77e-01 | 100.0% | 98.6% |
| 4198791 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.85 | 75.0 | 7.66e-01 | 97.8% | 97.8% |
| 4320100 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.85 | 77.0 | 7.84e-01 | 98.9% | 100.0% |
| 2971931 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 71.0 | 7.57e-01 | 94.6% | 100.0% |
| 4960795 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.85 | 79.0 | 7.91e-01 | 100.0% | 97.9% |
| 2088607 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.85 | 77.0 | 7.62e-01 | 100.0% | 93.8% |
| 4621870 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.84 | 79.0 | 7.85e-01 | 100.0% | 97.9% |
| 4160488 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.84 | 77.0 | 7.69e-01 | 100.0% | 96.8% |
| 3979224 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.84 | 78.0 | 7.62e-01 | 100.0% | 94.9% |
| 4422723 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.84 | 77.0 | 7.72e-01 | 100.0% | 97.9% |
| 1383593 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.82 | 74.0 | 7.21e-01 | 100.0% | 89.2% |
| 3972291 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.82 | 75.0 | 7.51e-01 | 100.0% | 97.9% |
| 4023611 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.81 | 74.0 | 6.97e-01 | 100.0% | 100.0% |
| 3974634 | 148.1.3.261 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small, AAA_lid_9 | 0.81 | 74.0 | 5.01e-01 | 98.9% | 30.0% |
| 3970200 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.80 | 71.0 | 7.25e-01 | 98.9% | 100.0% |
| 3947421 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.80 | 73.0 | 7.17e-01 | 100.0% | 94.0% |
| 4388243 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.79 | 73.0 | 4.81e-01 | 100.0% | 26.7% |
| 3272719 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.79 | 72.0 | 7.04e-01 | 98.9% | 100.0% |
| 3280817 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.79 | 70.0 | 7.13e-01 | 95.7% | 100.0% |
| 2391167 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.78 | 71.0 | 6.05e-01 | 100.0% | 63.1% |
| 3612861 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 69.0 | 6.70e-01 | 98.9% | 100.0% |
| 3212882 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.78 | 71.0 | 7.09e-01 | 100.0% | 96.8% |
| 3487258 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.77 | 71.0 | 6.97e-01 | 100.0% | 94.0% |
| None | — | 0.76 | 70.0 | 4.65e-01 | 100.0% | 27.1% | |
| 4558893 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.76 | 68.0 | 6.91e-01 | 95.7% | 98.9% |
| 3600215 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.76 | 64.0 | 6.63e-01 | 97.8% | 100.0% |
| 3450454 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.76 | 70.0 | 6.02e-01 | 100.0% | 73.6% |
| 3582881 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.76 | 69.0 | 6.86e-01 | 97.8% | 95.8% |
| 4094445 | 148.1.3.8 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small | 0.75 | 69.0 | 6.62e-01 | 100.0% | 90.5% |
| 3369792 | 148.1.3.211 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 | 0.73 | 62.0 | 6.19e-01 | 92.5% | 97.9% |
| 3806710 | 148.1.3.211 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 | 0.72 | 60.0 | 6.25e-01 | 91.4% | 98.8% |
| 3669454 | 148.1.3.211 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 | 0.72 | 64.0 | 6.21e-01 | 98.9% | 100.0% |
| 3435276 | 148.1.3.211 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 | 0.71 | 58.0 | 5.89e-01 | 94.6% | 92.2% |
| 3810079 | 148.1.3.211 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 | 0.69 | 58.0 | 5.99e-01 | 93.5% | 100.0% |
| 3350475 | 148.1.3.211 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 | 0.66 | 56.0 | 5.67e-01 | 93.5% | 97.8% |
| 3813282 | 148.1.3.211 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26587 | 0.65 | 57.0 | 5.49e-01 | 98.9% | 100.0% |
| 6565 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.61 | 54.0 | 4.95e-01 | 100.0% | 76.9% |
| 3816401 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.59 | 41.0 | 4.38e-01 | 100.0% | 85.0% |
| 3964784 | 7581.1.1.14 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Ketoacyl-synt_2 | 0.57 | 41.0 | 3.11e-01 | 75.3% | 48.3% |
| 4946728 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 39.0 | 3.03e-01 | 75.3% | 45.7% |
| 4496728 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.51 | 35.0 | 2.95e-01 | 72.0% | 70.0% |
| 5079472 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 40.0 | 2.91e-01 | 87.1% | 50.7% |