Back to structures

IMGVR_UViG_3300018003_000040-3300018003-Ga0187876_10083727

Arc-Vir

IMGVR_UViG_3300018003_000040-3300018003-Ga0187876_10083727

Quality

62.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-31_67-90
PDB
D2 medium residues 195-297
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1orsC00 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.54 38.0 3.55e-01 72.8% 75.8%
4g80T00 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.53 38.0 3.45e-01 73.8% 79.9%
4mlmA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.52 37.0 3.13e-01 75.7% 67.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4139338 2004.1.1.433 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.72 39.0 2.49e-01 95.1% 11.7%
4941789 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.56 37.0 3.23e-01 96.1% 46.0%
3945729 604.32.1.0 alpha bundles › Spectrin repeat-like › Recombination protein uvsY › Recombination protein uvsY 0.55 37.0 3.43e-01 70.9% 54.6%
3595988 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 40.0 3.19e-01 86.4% 80.0%