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IMGVR_UViG_3300018005_000356-3300018005-Ga0187878_10047675
Arc-VirIMGVR_UViG_3300018005_000356-3300018005-Ga0187878_10047675
Identity
- Kingdom:
- archaea
Quality
61.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 76-144
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2q2eB01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.67 | 60.0 | 4.18e-01 | 100.0% | 69.2% |
| 4fgmA01 | 2.60.40.3650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 60.0 | 4.45e-01 | 100.0% | 89.0% |
| 1mu5A01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.66 | 59.0 | 4.18e-01 | 100.0% | 74.3% |
| 3kd4A01 | 2.60.40.3140 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 58.0 | 4.10e-01 | 100.0% | 80.8% |
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.65 | 44.0 | 3.26e-01 | 71.0% | 35.6% |
| 3cwvA01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.64 | 58.0 | 4.14e-01 | 100.0% | 74.2% |
| 1s14B00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.63 | 57.0 | 4.20e-01 | 100.0% | 74.7% |
| 1aj6A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.62 | 56.0 | 4.00e-01 | 100.0% | 73.7% |
| 4khbC00 | 2.30.29.210 | Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p | 0.61 | 47.0 | 4.10e-01 | 82.6% | 55.7% |
| 1okjA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 54.0 | 4.90e-01 | 100.0% | 77.9% |
| 2knrA00 | 3.40.1530.20 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) | 0.61 | 53.0 | 4.44e-01 | 97.1% | 57.6% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 39.0 | 4.00e-01 | 72.5% | 69.2% |
| 1i3pA00 | 2.60.250.10 | Mainly Beta › Sandwich › Baculovirus p35 › Baculovirus p35 | 0.59 | 51.0 | 3.49e-01 | 100.0% | 90.1% |
| 6ro0D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 45.0 | 3.89e-01 | 82.6% | 58.2% |
| 2bw2A01 | 3.10.20.420 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain | 0.59 | 39.0 | 4.30e-01 | 81.2% | 87.3% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.59 | 41.0 | 2.88e-01 | 73.9% | 25.6% |
| 2vw9B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 43.0 | 3.82e-01 | 81.2% | 59.0% |
| 3ifrB02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 50.0 | 3.42e-01 | 100.0% | 81.4% |
| 1w18A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 45.0 | 2.79e-01 | 95.7% | 82.9% |
| 1bdgA01 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.55 | 47.0 | 3.22e-01 | 100.0% | 78.5% |
| 3i8bA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 49.0 | 3.43e-01 | 100.0% | 90.2% |
| 3pg4A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 38.0 | 2.65e-01 | 72.5% | 24.8% |
| 2if1A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.55 | 46.0 | 3.85e-01 | 95.7% | 65.9% |
| 1v29B02 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 3.57e-01 | 78.3% | 61.9% |
| 2y7bA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 41.0 | 3.42e-01 | 85.5% | 85.8% |
| 4n4rB00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.54 | 36.0 | 2.91e-01 | 71.0% | 44.4% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.53 | 38.0 | 3.01e-01 | 76.8% | 45.6% |
| 4dkwA00 | 3.30.420.280 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.53 | 46.0 | 3.38e-01 | 100.0% | 43.8% |
| 6rupA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 38.0 | 3.38e-01 | 81.2% | 56.8% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.52 | 46.0 | 4.31e-01 | 100.0% | 100.0% |
| 7sulB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.83e-01 | 100.0% | 91.8% |
| 1ko2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 40.0 | 2.84e-01 | 94.2% | 26.5% |
| 3bm4A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 41.0 | 3.01e-01 | 89.9% | 45.7% |
| 7w8fA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.50 | 45.0 | 3.56e-01 | 100.0% | 65.2% |
| 2mmpA00 | 3.30.160.830 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 33.0 | 3.28e-01 | 97.1% | 62.3% |
| 4h5iB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 43.0 | 2.79e-01 | 100.0% | 89.0% |
| 2jkbA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.50 | 39.0 | 2.58e-01 | 91.3% | 93.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028624 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.66 | 59.0 | 3.82e-01 | 97.1% | 90.3% |
| 3441531 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.66 | 56.0 | 3.63e-01 | 92.8% | 86.1% |
| 5055184 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.65 | 43.0 | 4.05e-01 | 71.0% | 56.5% |
| 3300056 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.63 | 47.0 | 4.48e-01 | 97.1% | 67.1% |
| 3260972 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 42.0 | 3.57e-01 | 97.1% | 40.8% |
| 3920028 | 220.1.1.156 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF30805 | 0.62 | 52.0 | 4.38e-01 | 94.2% | 54.2% |
| 4137471 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.62 | 56.0 | 4.78e-01 | 100.0% | 65.5% |
| 4185827 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.62 | 55.0 | 4.71e-01 | 100.0% | 64.5% |
| 3696871 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.59 | 47.0 | 3.03e-01 | 98.6% | 18.7% |
| 3254798 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 42.0 | 3.68e-01 | 89.9% | 48.2% |
| 3698801 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.58 | 45.0 | 2.79e-01 | 82.6% | 78.5% |
| 3708818 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.57 | 41.0 | 3.46e-01 | 76.8% | 52.2% |
| 1758564 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.57 | 45.0 | 3.43e-01 | 88.4% | 39.1% |
| 4963970 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 4.32e-01 | 95.7% | 94.7% |
| 3177221 | 3080.1.1.0 ↗ | a+b complex topology › Necrosis and ethylene-inducing peptide 1-like proteins › Necrosis and ethylene-inducing peptide 1-like proteins › Necrosis and ethylene-inducing peptide 1-like proteins | 0.56 | 50.0 | 3.29e-01 | 100.0% | 55.0% |
| 3516502 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.55 | 41.0 | 4.12e-01 | 82.6% | 78.6% |
| 5037168 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.54 | 42.0 | 3.55e-01 | 91.3% | 48.8% |
| 4183697 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.53 | 40.0 | 3.05e-01 | 82.6% | 35.5% |
| 4376921 | 11.1.1.640 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N | 0.53 | 43.0 | 3.68e-01 | 92.8% | 81.7% |
| 3719692 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 39.0 | 2.77e-01 | 82.6% | 46.7% |
| 4569359 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 36.0 | 3.37e-01 | 71.0% | 91.8% |
| 3449246 | 5.1.3.54 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 | 0.51 | 44.0 | 3.19e-01 | 95.7% | 38.4% |
| 3239567 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 41.0 | 3.58e-01 | 91.3% | 58.1% |
| 3940300 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 38.0 | 2.95e-01 | 91.3% | 34.5% |
| 3892769 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 3.73e-01 | 95.7% | 97.0% |
| 3232476 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.50 | 38.0 | 3.40e-01 | 91.3% | 57.0% |
| 3861759 | 11.1.1.640 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N | 0.50 | 40.0 | 3.69e-01 | 95.7% | 93.0% |