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IMGVR_UViG_3300018005_000493-3300018005-Ga0187878_10109921
Arc-VirIMGVR_UViG_3300018005_000493-3300018005-Ga0187878_10109921
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-84_166-177
Domain cluster:
rep: IMGVR_UViG_3300021483_000005-3300021483-Ga0190331_100001841__D139-234
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00961.25 best | LAGLIDADG_1 | 42.4 | 1.50e-10 | 82.3% | 57.8% |
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1af5A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.83 | 62.0 | 5.61e-01 | 93.8% | 59.5% |
| 2ab5B01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.77 | 68.0 | 6.08e-01 | 92.7% | 89.1% |
| 4lq0A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.76 | 67.0 | 5.66e-01 | 91.7% | 78.9% |
| 4efjA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.76 | 68.0 | 5.82e-01 | 92.7% | 80.7% |
| 4yhxA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.75 | 66.0 | 5.69e-01 | 91.7% | 80.9% |
| 5a72A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.74 | 66.0 | 5.45e-01 | 92.7% | 73.2% |
| 4lq0A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.73 | 64.0 | 5.47e-01 | 91.7% | 82.6% |
| 3ko2A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.73 | 64.0 | 5.27e-01 | 91.7% | 70.2% |
| 2ex5A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.73 | 63.0 | 4.80e-01 | 91.7% | 59.4% |
| 4z1xA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.72 | 63.0 | 5.40e-01 | 91.7% | 79.0% |
| 3e54A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.71 | 63.0 | 5.21e-01 | 93.8% | 69.8% |
| 4yisB02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.68 | 60.0 | 5.19e-01 | 91.7% | 79.4% |
| 7a6pB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.64 | 32.0 | 2.81e-01 | 83.3% | 31.9% |
| 3jr1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 43.0 | 4.29e-01 | 78.1% | 67.7% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.63 | 31.0 | 4.17e-01 | 87.5% | 95.7% |
| 1dfaA03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.63 | 49.0 | 4.94e-01 | 87.5% | 84.2% |
| 3pcoB05 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.63 | 54.0 | 4.17e-01 | 93.8% | 91.4% |
| 3bwlB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 31.0 | 2.88e-01 | 85.4% | 35.8% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.63 | 55.0 | 5.26e-01 | 94.8% | 96.4% |
| 3l4gB04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.62 | 53.0 | 4.17e-01 | 92.7% | 93.5% |
| 2cjaA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.61 | 47.0 | 3.34e-01 | 85.4% | 71.6% |
| 4g84A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.60 | 50.0 | 3.49e-01 | 92.7% | 87.1% |
| 6aqgD02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.60 | 53.0 | 3.61e-01 | 97.9% | 87.7% |
| 6nrzA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.60 | 52.0 | 3.56e-01 | 97.9% | 87.0% |
| 3racA00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 48.0 | 3.34e-01 | 90.6% | 87.3% |
| 6h9xA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 47.0 | 3.30e-01 | 90.6% | 65.3% |
| 2b02A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 30.0 | 2.98e-01 | 83.3% | 45.2% |
| 4up8A02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 51.0 | 3.30e-01 | 96.9% | 83.3% |
| 3lyxB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 31.0 | 2.88e-01 | 86.5% | 40.0% |
| 6nhiA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.57 | 48.0 | 3.37e-01 | 94.8% | 93.5% |
| 3a32A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.57 | 48.0 | 3.45e-01 | 97.9% | 81.5% |
| 3bdrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 38.0 | 3.21e-01 | 85.4% | 42.3% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.55 | 46.0 | 4.21e-01 | 91.7% | 85.9% |
| 4f3lA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 32.0 | 2.97e-01 | 94.8% | 45.0% |
| 3orqA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.54 | 39.0 | 3.06e-01 | 76.0% | 67.3% |
| 3icyA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 28.0 | 2.69e-01 | 82.3% | 38.1% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 43.0 | 3.70e-01 | 97.9% | 53.7% |
| 3kulA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 39.0 | 4.01e-01 | 85.4% | 82.0% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.53 | 32.0 | 3.55e-01 | 89.6% | 75.3% |
| 2c4xA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 3.81e-01 | 94.8% | 89.7% |
| 2qyxA02 | 3.30.70.1360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › mj0159-like | 0.51 | 40.0 | 3.86e-01 | 85.4% | 96.5% |
| 5i4nA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 37.0 | 3.78e-01 | 79.2% | 81.5% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4621497 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.91 | 66.0 | 6.41e-01 | 95.8% | 68.6% |
| 3206012 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.86 | 53.0 | 5.24e-01 | 87.5% | 60.0% |
| 4934295 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.80 | 61.0 | 6.04e-01 | 96.9% | 76.0% |
| 4997674 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.80 | 71.0 | 5.86e-01 | 91.7% | 74.8% |
| 4937053 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.80 | 62.0 | 6.19e-01 | 92.7% | 79.0% |
| 5030026 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 56.0 | 5.81e-01 | 86.5% | 80.0% |
| 4276586 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.77 | 59.0 | 5.40e-01 | 87.5% | 63.3% |
| 286927 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.77 | 68.0 | 5.97e-01 | 92.7% | 85.1% |
| 3738330 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.76 | 67.0 | 5.76e-01 | 91.7% | 83.6% |
| 1787814 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.75 | 66.0 | 5.51e-01 | 91.7% | 74.5% |
| 4355163 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.75 | 66.0 | 5.80e-01 | 91.7% | 86.5% |
| 4572272 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.75 | 54.0 | 5.02e-01 | 87.5% | 60.0% |
| 1388654 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.75 | 65.0 | 5.32e-01 | 91.7% | 70.7% |
| 1687926 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.74 | 66.0 | 5.45e-01 | 92.7% | 73.2% |
| 2411782 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.74 | 65.0 | 5.48e-01 | 91.7% | 79.7% |
| 2092599 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.74 | 65.0 | 5.52e-01 | 91.7% | 77.6% |
| 5023686 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.74 | 65.0 | 5.76e-01 | 91.7% | 85.4% |
| 160625 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.73 | 63.0 | 4.80e-01 | 91.7% | 59.4% |
| 1790206 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.73 | 64.0 | 5.57e-01 | 91.7% | 87.4% |
| 4506564 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.73 | 64.0 | 5.58e-01 | 91.7% | 84.4% |
| 4222799 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.73 | 64.0 | 5.27e-01 | 91.7% | 71.6% |
| 4653164 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.72 | 64.0 | 5.62e-01 | 94.8% | 85.2% |
| 4509301 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.72 | 63.0 | 5.20e-01 | 92.7% | 69.4% |
| 5028136 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.71 | 56.0 | 5.26e-01 | 93.8% | 70.4% |
| 169883 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.71 | 63.0 | 5.21e-01 | 93.8% | 69.8% |
| 4115001 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.70 | 61.0 | 5.43e-01 | 91.7% | 83.8% |
| 4200948 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.70 | 48.0 | 4.77e-01 | 85.4% | 68.0% |
| 4282335 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.69 | 61.0 | 5.12e-01 | 93.8% | 69.7% |
| 4395233 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.68 | 59.0 | 5.03e-01 | 91.7% | 81.4% |
| 3206013 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.68 | 58.0 | 5.08e-01 | 91.7% | 81.4% |
| 4962526 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.67 | 58.0 | 4.85e-01 | 94.8% | 67.3% |
| 4418705 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.67 | 58.0 | 4.85e-01 | 91.7% | 70.3% |
| 3603296 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.66 | 60.0 | 4.82e-01 | 100.0% | 76.2% |
| 4377946 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.66 | 59.0 | 5.26e-01 | 93.8% | 75.4% |
| 4997276 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.66 | 55.0 | 4.56e-01 | 91.7% | 80.5% |
| 5075417 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.66 | 50.0 | 4.77e-01 | 86.5% | 68.7% |
| 4629783 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.64 | 56.0 | 5.25e-01 | 97.9% | 89.2% |
| 3173041 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.64 | 56.0 | 5.13e-01 | 94.8% | 92.0% |
| 4962527 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.64 | 54.0 | 4.53e-01 | 91.7% | 72.5% |
| 4381821 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.63 | 55.0 | 4.25e-01 | 94.8% | 89.5% |
| 4030168 | 206.1.1.71 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo | 0.63 | 47.0 | 3.09e-01 | 80.2% | 28.0% |
| 3950275 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.62 | 43.0 | 4.54e-01 | 91.7% | 82.4% |
| 3175120 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.62 | 51.0 | 4.88e-01 | 92.7% | 77.3% |
| 4114958 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.62 | 53.0 | 4.21e-01 | 94.8% | 88.2% |
| 3205225 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.61 | 55.0 | 5.22e-01 | 93.8% | 89.1% |
| 3695783 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.61 | 31.0 | 2.83e-01 | 86.5% | 36.2% |
| 4551342 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 31.0 | 3.28e-01 | 84.4% | 56.5% |
| 4962861 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.57 | 31.0 | 2.96e-01 | 84.4% | 43.6% |
| 3272167 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 41.0 | 2.91e-01 | 77.1% | 28.7% |
| 4949430 | 304.122.1.1 ↗ | a+b two layers › Alpha-beta plaits › Nitrogen repressor-like proteins › Nitrogen repressor-like proteins › NRD1_2 | 0.55 | 42.0 | 3.95e-01 | 82.3% | 96.7% |
| 3708726 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 42.0 | 2.76e-01 | 87.5% | 19.1% |
| 3823591 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 35.0 | 3.49e-01 | 76.0% | 64.0% |
| 4447416 | 304.8.1.53 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th | 0.53 | 37.0 | 3.06e-01 | 83.3% | 38.9% |
| 3939857 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 38.0 | 3.21e-01 | 83.3% | 46.5% |
| 4329557 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.52 | 34.0 | 3.56e-01 | 76.0% | 72.2% |
| 3693361 | 9.13.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 | 0.51 | 39.0 | 3.84e-01 | 93.8% | 74.3% |
| 4034134 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.51 | 44.0 | 4.02e-01 | 93.8% | 88.0% |
| 3398909 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.50 | 43.0 | 2.95e-01 | 97.9% | 84.0% |
| 3399448 | 2011.1.1.21 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Gaa1 | 0.50 | 38.0 | 2.68e-01 | 81.2% | 80.9% |
| 3362243 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.50 | 39.0 | 3.16e-01 | 86.5% | 91.2% |
| 5035141 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.50 | 42.0 | 3.08e-01 | 94.8% | 93.0% |
D2
medium
residues 85-165
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ko2A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.72 | 65.0 | 5.14e-01 | 100.0% | 76.4% |
| 7tzoA01 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.65 | 45.0 | 3.58e-01 | 72.8% | 37.9% |
| 3thxB03 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.65 | 45.0 | 3.48e-01 | 72.8% | 33.2% |
| 2jexA01 | 1.10.287.30 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 | 0.61 | 46.0 | 4.34e-01 | 79.0% | 97.9% |
| 2vvwA00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.60 | 41.0 | 3.40e-01 | 71.6% | 70.0% |
| 2d2mD00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 48.0 | 4.03e-01 | 90.1% | 93.1% |
| 1urvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 49.0 | 4.01e-01 | 92.6% | 94.8% |
| 8cdaC01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.57 | 40.0 | 3.59e-01 | 74.1% | 96.6% |
| 2v7kA01 | 1.20.58.1320 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 36.0 | 3.26e-01 | 71.6% | 66.1% |
| 2khmA01 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.52 | 37.0 | 3.44e-01 | 75.3% | 88.0% |
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.51 | 38.0 | 3.12e-01 | 80.2% | 42.2% |
| 3k3uA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 44.0 | 3.75e-01 | 98.8% | 95.6% |
| 1gcvB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 40.0 | 3.46e-01 | 90.1% | 98.5% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 41.0 | 3.53e-01 | 93.8% | 92.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4501827 | 3843.1.1.1 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 | 0.69 | 52.0 | 4.74e-01 | 80.2% | 74.3% |
| 3482404 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.61 | 53.0 | 3.89e-01 | 100.0% | 78.8% |
| 158514 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.59 | 48.0 | 4.03e-01 | 90.1% | 93.1% |
| 4996294 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.59 | 43.0 | 4.13e-01 | 79.0% | 68.4% |
| 3770920 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.58 | 39.0 | 3.33e-01 | 71.6% | 60.7% |
| 3218595 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.54 | 43.0 | 3.37e-01 | 92.6% | 76.5% |
| 3601959 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.52 | 38.0 | 3.43e-01 | 86.4% | 55.5% |