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IMGVR_UViG_3300018005_000640-3300018005-Ga0187878_100390816
Arc-VirIMGVR_UViG_3300018005_000640-3300018005-Ga0187878_100390816
Identity
- Kingdom:
- archaea
Quality
83.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-93
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.59 | 31.0 | 3.61e-01 | 98.9% | 74.6% |
| 3au4A04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 43.0 | 4.33e-01 | 90.2% | 77.4% |
| 2ekhA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 33.0 | 3.52e-01 | 100.0% | 65.0% |
| 4iapA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 45.0 | 4.51e-01 | 90.2% | 84.8% |
| 3a8pB01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 49.0 | 4.54e-01 | 94.6% | 75.9% |
| 3t0pA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.56 | 40.0 | 3.26e-01 | 75.0% | 93.0% |
| 1droA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 47.0 | 4.28e-01 | 92.4% | 77.0% |
| 3tfmA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 45.0 | 4.26e-01 | 88.0% | 78.0% |
| 3mh9A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.55 | 48.0 | 3.77e-01 | 100.0% | 90.7% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.54 | 46.0 | 4.11e-01 | 96.7% | 67.4% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 34.0 | 3.85e-01 | 97.8% | 89.4% |
| 4fflA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.54 | 41.0 | 3.01e-01 | 82.6% | 52.9% |
| 1egxA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 44.0 | 4.14e-01 | 91.3% | 81.7% |
| 2la7A01 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 47.0 | 4.26e-01 | 100.0% | 97.7% |
| 2avtB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.53 | 38.0 | 3.07e-01 | 73.9% | 93.6% |
| 5j3tA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 43.0 | 3.90e-01 | 91.3% | 65.1% |
| 2codA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 41.0 | 4.14e-01 | 90.2% | 82.3% |
| 4wsfA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 41.0 | 3.88e-01 | 85.9% | 72.1% |
| 1tj6A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 42.0 | 3.92e-01 | 91.3% | 83.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3238738 | 207.1.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 | 0.64 | 37.0 | 2.61e-01 | 98.9% | 19.0% |
| 3522450 | 391.1.2.2 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › PSP94 | 0.60 | 30.0 | 3.27e-01 | 82.6% | 56.2% |
| 3713703 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 49.0 | 4.58e-01 | 94.6% | 73.0% |
| 3594856 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 46.0 | 4.42e-01 | 94.6% | 73.6% |
| 3614421 | 220.1.1.236 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_27 | 0.57 | 45.0 | 4.44e-01 | 96.7% | 78.0% |
| 3211867 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 45.0 | 4.30e-01 | 88.0% | 72.7% |
| 4550532 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.53 | 35.0 | 3.53e-01 | 100.0% | 66.7% |
| 3690811 | 220.1.1.67 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 | 0.53 | 42.0 | 4.10e-01 | 85.9% | 78.0% |
| 3233686 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.53 | 44.0 | 3.79e-01 | 91.3% | 57.2% |
| 3230048 | 220.1.1.67 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 | 0.53 | 42.0 | 3.61e-01 | 87.0% | 61.3% |
| 3523446 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.53 | 42.0 | 4.17e-01 | 91.3% | 81.0% |
| 3478983 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 42.0 | 4.02e-01 | 85.9% | 75.2% |
| 3720028 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 44.0 | 4.08e-01 | 91.3% | 76.5% |
| 3172078 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.52 | 41.0 | 3.12e-01 | 100.0% | 33.3% |
| 3306545 | 331.2.1.8 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › CPSF73-100_C | 0.52 | 30.0 | 3.18e-01 | 77.2% | 61.2% |
| 3739666 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.52 | 30.0 | 3.06e-01 | 77.2% | 56.7% |
| 3412870 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 38.0 | 4.08e-01 | 97.8% | 97.3% |
| 4346967 | 331.2.1.8 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › CPSF73-100_C | 0.51 | 30.0 | 3.02e-01 | 77.2% | 55.6% |
| 4941159 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.51 | 31.0 | 2.99e-01 | 84.8% | 54.3% |
D2
high
residues 109-205
Domain cluster:
rep: NC_054714.1__YP_010056779.1__KHO57_gp075__00075__D3-95
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7ze1A01 | 2.60.40.1520 | Mainly Beta › Sandwich › Immunoglobulin-like › Hemocyanin, C-terminal domain | 0.60 | 52.0 | 3.94e-01 | 94.8% | 70.1% |
| 3wkyB03 | 2.60.40.1520 | Mainly Beta › Sandwich › Immunoglobulin-like › Hemocyanin, C-terminal domain | 0.58 | 50.0 | 3.78e-01 | 94.8% | 58.4% |
| 4g1gA02 | 2.70.20.60 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, C-terminal domain | 0.57 | 49.0 | 4.10e-01 | 94.8% | 88.2% |
| 2x10A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 38.0 | 3.23e-01 | 88.7% | 46.3% |
| 4m37A02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.51 | 44.0 | 3.74e-01 | 97.9% | 97.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4108991 | 221.1.2.5 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 | 0.64 | 33.0 | 3.22e-01 | 100.0% | 46.7% |
| 4433583 | 11.1.1.61 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Hemocyanin_C | 0.61 | 53.0 | 3.88e-01 | 94.8% | 60.0% |
| 3414874 | 11.1.1.61 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Hemocyanin_C | 0.60 | 52.0 | 3.73e-01 | 94.8% | 60.4% |
| 3071506 | 11.1.1.61 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Hemocyanin_C | 0.59 | 52.0 | 3.94e-01 | 94.8% | 65.8% |
| 3588985 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 46.0 | 4.15e-01 | 94.8% | 61.5% |
| 3901411 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.58 | 40.0 | 3.92e-01 | 93.8% | 64.5% |
| 3192644 | 4139.1.1.1 ↗ | a+b two layers › AMMECR1-like › AMMECR1-like › AMMECR1-like › AMMECR1 | 0.56 | 48.0 | 4.24e-01 | 96.9% | 66.9% |
| 3608781 | 244.1.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE | 0.55 | 44.0 | 4.52e-01 | 87.6% | 96.8% |
| 3743149 | 244.1.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE | 0.54 | 43.0 | 4.26e-01 | 86.6% | 85.7% |
| 4985428 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.52 | 39.0 | 4.22e-01 | 93.8% | 98.7% |
| 3586277 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 44.0 | 4.14e-01 | 94.8% | 80.9% |